RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CPNE9Q8IYJ1 553 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 OR2T11Q8NH01 316 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 POLR1BQ9H9Y6 1135 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 VCX3AQ9NNX9 186 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 PTBP2Q9UKA9 531 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 PCDHB1Q9Y5F3 818 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 COL6A6A6NMZ7 2263 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 BBIP1A8MTZ0 92 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TRMUO75648 421 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 UBXN7O94888 489 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 RASAL1O95294 804 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ESRRBO95718 433 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CD160O95971 181 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ADRB1P08588 477 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CMPK1P30085 196 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 IL2P60568 153 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 PFN3P60673 137 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 FASTKQ14296 549 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TBPL2Q6SJ96 375 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZSWIM9Q86XI8 627 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 MARCH9Q86YJ5 346 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 FBLIM1Q8WUP2 373 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 C19orf60Q96EN9 201 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 LRGUKQ96M69 825 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 NSUN5Q96P11 429 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ULBP3Q9BZM4 244 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 SEMA6AQ9H2E6 1030 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 RHBGQ9H310 441 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 NOL11Q9H8H0 719 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLCO1B1Q9Y6L6 691 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 C2orf74A8MZ97 194 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPR89AB7ZAQ6 455 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 UBDO15205 165 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 IGLV3-19P01714 112 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPR89BP0CG08 455 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCDC166P0CW27 439 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF37AP17032 561 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ZNF140P52738 457 aaPredicted RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 LIMK1P53667 647 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 PCBP4P57723 403 aaKnown RBP7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ADRM1Q16186 407 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 XAF1Q6GPH4 301 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 Q6ZNX1 250 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TMEM26Q6ZUK4 368 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TSPAN14Q8NG11 270 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 TSPEARQ8WU66 669 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CCDC126Q96EE4 140 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 EFHD1Q9BUP0 239 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 MRGBPQ9NV56 204 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ACTR3BQ9P1U1 418 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 GIMAP2Q9UG22 337 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 KLK13Q9UKR3 277 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 ASB1Q9Y576 335 aa7.11□□□□□ -1.27
CDC42BPA-208ENST00000442054 CR2P20023 1033 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CTSCP53634 463 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 STX5Q13190 355 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CSHL1Q14406 222 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 NRF1Q16656 503 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 GTF2IRD2BQ6EKJ0 949 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 IYDQ6PHW0 289 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 DLEU7Q6UYE1 221 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 GTF2IRD2Q86UP8 949 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 RBM12BQ8IXT5 1001 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC25A45Q8N413 288 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 METTL21AQ8WXB1 218 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CIB1Q99828 191 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC25A23Q9BV35 468 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 PNPLA3Q9NST1 481 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 POT1Q9NUX5 634 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 DLL3Q9NYJ7 618 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 GALPQ9UBC7 116 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 POLG2Q9UHN1 485 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SNX7Q9UNH6 387 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SPACA6W5XKT8 324 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 C2orf16Q68DN1 1984 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 A0A1W2PR77 199 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SUPT3HB4E1H0 165 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 GPR39O43194 453 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SUPT3HO75486 399 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 EEDO75530 441 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 PRLP01236 227 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CEACAM5P06731 702 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 CELA2BP08218 269 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 TNNI3P19429 210 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SHMT2P34897 504 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 UBE2R2Q712K3 238 aaPredicted RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 AMIGO1Q86WK6 493 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SLC22A9Q8IVM8 553 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 COQ10AQ96MF6 247 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 TIMM29Q9BSF4 260 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 MRPL1Q9BYD6 325 aaKnown RBP7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 TMEM45AQ9NWC5 275 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 TBC1D29Q9UFV1 150 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 PLAGL1Q9UM63 463 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SATB2Q9UPW6 733 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 NAALAD2Q9Y3Q0 740 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 IGF2RP11717 2491 aa7.1□□□□□ -1.27
CDC42BPA-208ENST00000442054 SPINT1O43278 529 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms