RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 LILRB1Q8NHL6 650 aaPredicted RBP16.22■□□□□ 0.19
PMS1-213ENST00000441310 RHEBL1Q8TAI7 183 aa16.22■□□□□ 0.19
PMS1-213ENST00000441310 TSGA13Q96PP4 275 aa16.22■□□□□ 0.19
PMS1-213ENST00000441310 IL1RAPQ9NPH3 570 aa16.22■□□□□ 0.19
PMS1-213ENST00000441310 HEBP1Q9NRV9 189 aa16.22■□□□□ 0.19
PMS1-213ENST00000441310 NLRC5Q86WI3 1866 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 BTN3A1O00481 513 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 FGF10O15520 208 aaPredicted RBP16.21■□□□□ 0.19
PMS1-213ENST00000441310 SLC2A3P11169 496 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 ERVPABLB-1P60509 514 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 RHAGQ02094 409 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 RUNX1T1Q06455 604 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 RUNDC3AQ59EK9 446 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 TMCO2Q7Z6W1 182 aaPredicted RBP16.21■□□□□ 0.19
PMS1-213ENST00000441310 COMMD7Q86VX2 200 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 GTPBP2Q9BX10 602 aaKnown RBP16.21■□□□□ 0.19
PMS1-213ENST00000441310 FBXO44Q9H4M3 255 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 THUMPD1Q9NXG2 353 aaKnown RBP16.21■□□□□ 0.19
PMS1-213ENST00000441310 PTPRDP23468 1912 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 PLA2G10O15496 165 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 PIRTP0C851 137 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 EVI2BP34910 448 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 GPC1P35052 558 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 PIK3CGP48736 1102 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 CSNK2BP67870 215 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 IHHQ14623 411 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 CCNJQ5T5M9 372 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 FUT10Q6P4F1 479 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 ANKRD46Q86W74 232 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 RNF130Q86XS8 419 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 ZBTB44Q8NCP5 570 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 TRAF4Q9BUZ4 470 aaPredicted RBP16.21■□□□□ 0.19
PMS1-213ENST00000441310 ABCB9Q9NP78 766 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 MARCH5Q9NX47 278 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 SCML1Q9UN30 329 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 TLR6Q9Y2C9 796 aa16.21■□□□□ 0.19
PMS1-213ENST00000441310 SMIM30A4D0T7 59 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 MTMR11A4FU01 709 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 LINC00862A6NCI5 91 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 WASHC1A8K0Z3 465 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 RHOBTB1O94844 696 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 TSPAN19P0C672 248 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 CLEC2LP0C7M8 214 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 ACVRL1P37023 503 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 PSPHP78330 225 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 OLR1P78380 273 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 DOC2BQ14184 412 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 NFE2L1Q14494 772 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 TIMM50Q3ZCQ8 353 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 TIGD3Q6B0B8 471 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 ZNF605Q86T29 641 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 UTP15Q8TED0 518 aaKnown RBP16.21■□□□□ 0.18
PMS1-213ENST00000441310 BCL7CQ8WUZ0 217 aaPredicted RBP16.21■□□□□ 0.18
PMS1-213ENST00000441310 DNAJA4Q8WW22 397 aaPredicted RBP16.21■□□□□ 0.18
PMS1-213ENST00000441310 KIAA1191Q96A73 305 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 TESCQ96BS2 214 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 DIRAS2Q96HU8 199 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 PITX2Q99697 317 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 REEP1Q9H902 201 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 SP110Q9HB58 689 aa16.21■□□□□ 0.18
PMS1-213ENST00000441310 VWA8A3KMH1 1905 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 MYO7AQ13402 2215 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 FABP12A6NFH5 140 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 B3GALT4O96024 378 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 CPN2P22792 545 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 RGS1Q08116 209 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 FOXD4Q12950 439 aaPredicted RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 SEMA3AQ14563 771 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 GARNL3Q5VVW2 1013 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 KIAA1324Q6UXG2 1013 aaKnown RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 AKAP1Q92667 903 aaKnown RBP eCLIP16.2■□□□□ 0.18
PMS1-213ENST00000441310 CASD1Q96PB1 797 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 OR52E6Q96RD3 313 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 DCLRE1CQ96SD1 692 aaKnown RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 GALNT9Q9HCQ5 603 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 NLKQ9UBE8 527 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 CMAHPQ9Y471 501 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 KIAA0100Q14667 2235 aaKnown RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 PDE9AO76083 593 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 FABP3P05413 133 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 MAGEA2P43356 314 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 MAB21L1Q13394 359 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 KIAA0040Q15053 153 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 INO80DQ53TQ3 878 aaPredicted RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 TYW3Q6IPR3 259 aaKnown RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 KDELC1Q6UW63 502 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 ZSWIM9Q86XI8 627 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 CCDC117Q8IWD4 279 aaPredicted RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 HRASLS5Q96KN8 279 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 MAGEB10Q96LZ2 347 aaPredicted RBP16.2■□□□□ 0.18
PMS1-213ENST00000441310 DPY30Q9C005 99 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 MFSD1Q9H3U5 465 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 RERGLQ9H628 205 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 STOML2Q9UJZ1 356 aa16.2■□□□□ 0.18
PMS1-213ENST00000441310 MYO16Q9Y6X6 1858 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 CCT3P49368 545 aaKnown RBP16.19■□□□□ 0.18
PMS1-213ENST00000441310 BRAT1Q6PJG6 821 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 CCDC149Q6ZUS6 474 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 KRT73Q86Y46 540 aa16.19■□□□□ 0.18
PMS1-213ENST00000441310 KLHDC8BQ8IXV7 354 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms