RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 EFCAB3Q8N7B9 438 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-210ENST00000441135 DRC3Q9H069 523 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 NT5DC2Q9H857 520 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 ZNF304Q9HCX3 659 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 SEMA3GQ9NS98 782 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 PSMC3IPQ9P2W1 217 aaPredicted RBP17.3■□□□□ 0.36
SMPD4-210ENST00000441135 TMCO1Q9UM00 188 aa17.3■□□□□ 0.36
SMPD4-210ENST00000441135 PCSK5Q92824 1860 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 IGLV3-12A0A075B6K2 115 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 VSTM2BA6NLU5 285 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 P2RX6O15547 441 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 MED26O95402 600 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 RBP1P09455 135 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 SLC35G6P0C7Q6 338 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 GMPRP36959 345 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 SCTRP47872 440 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 AIMP2Q13155 320 aaKnown RBP17.29■□□□□ 0.36
SMPD4-210ENST00000441135 E2F2Q14209 437 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 TECRLQ5HYJ1 363 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 CATSPEREQ5SY80 951 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 ATG9BQ674R7 924 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 TMEM214Q6NUQ4 689 aaKnown RBP17.29■□□□□ 0.36
SMPD4-210ENST00000441135 SLCO4C1Q6ZQN7 724 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 TTLQ8NG68 377 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 SLC13A3Q8WWT9 602 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 COL26A1Q96A83 441 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 PNPLA2Q96AD5 504 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 WDR34Q96EX3 536 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 TSNARE1Q96NA8 513 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 CD244Q9BZW8 370 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 VPS11Q9H270 941 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 ATP13A2Q9NQ11 1180 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 ZNF282Q9UDV7 671 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-210ENST00000441135 ZFP69BQ9UJL9 534 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 FBXL4Q9UKA2 621 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 SLC22A7Q9Y694 548 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 MAU2Q9Y6X3 613 aa17.29■□□□□ 0.36
SMPD4-210ENST00000441135 FLNCQ14315 2725 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 MED13Q9UHV7 2174 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 SUPT3HB4E1H0 165 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 H0YIG0 161 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 UBXN8O00124 270 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 MAP2K7O14733 419 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 LCMT2O60294 686 aaKnown RBP17.28■□□□□ 0.36
SMPD4-210ENST00000441135 SUPT3HO75486 399 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 NSA2O95478 260 aaKnown RBP17.28■□□□□ 0.36
SMPD4-210ENST00000441135 C1GALT1C1LP0DN25 315 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 GDF5P43026 501 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 HSPA7P48741 367 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 OCA2Q04671 838 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 RAPSNQ13702 412 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 TBCCQ15814 346 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 RBBP7Q16576 425 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 PDK4Q16654 411 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 C18orf21Q32NC0 220 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-210ENST00000441135 NIPAL1Q6NVV3 410 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 JMJD6Q6NYC1 403 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-210ENST00000441135 TDRPQ86YL5 185 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 TRPV3Q8NET8 790 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 NT5CQ8TCD5 201 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 ACMSDQ8TDX5 336 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 TM9SF4Q92544 642 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 SOX17Q9H6I2 414 aaPredicted RBP17.28■□□□□ 0.36
SMPD4-210ENST00000441135 HS3ST3B1Q9Y662 390 aa17.28■□□□□ 0.36
SMPD4-210ENST00000441135 FEZF1A0PJY2 475 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 K7EPI3 171 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 CLGNO14967 610 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 FOXS1O43638 330 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 OR1F1O43749 312 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 H2AFYO75367 372 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 FBLP22087 321 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 VARSP26640 1264 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 CASP2P42575 452 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 ALDH18A1P54886 795 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 VSNL1P62760 191 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 NAA30Q147X3 362 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 SETDB1Q15047 1291 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 IRAK1BP1Q5VVH5 260 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 SLC6A19Q695T7 634 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 EMBQ6PCB8 327 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 TMEM151BQ8IW70 566 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 KRT78Q8N1N4 520 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 PLD6Q8N2A8 252 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 DTWD1Q8N5C7 304 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 RBMXL3Q8N7X1 1067 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 CPT1CQ8TCG5 803 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 STT3BQ8TCJ2 826 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 MIEF2Q96C03 454 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 CRB3Q9BUF7 120 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 EFCAB11Q9BUY7 163 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 SPNS1Q9H2V7 528 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 SLAMF7Q9NQ25 335 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 C14orf105Q9NVL8 296 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 MAP4K5Q9Y4K4 846 aa17.27■□□□□ 0.36
SMPD4-210ENST00000441135 TNPO3Q9Y5L0 923 aaKnown RBP17.27■□□□□ 0.36
SMPD4-210ENST00000441135 HECTD1Q9ULT8 2610 aa17.27■□□□□ 0.35
SMPD4-210ENST00000441135 SOCS6O14544 535 aa17.26■□□□□ 0.35
SMPD4-210ENST00000441135 VPS4BO75351 444 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms