RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 OR1F2PQ96R84 312 aa17.41■□□□□ 0.38
AC004540.1-201ENST00000439120 EGFL8Q99944 293 aa17.41■□□□□ 0.38
AC004540.1-201ENST00000439120 KCNK13Q9HB14 408 aa17.41■□□□□ 0.38
AC004540.1-201ENST00000439120 PLAC1Q9HBJ0 212 aa17.41■□□□□ 0.38
AC004540.1-201ENST00000439120 OR2W5A6NFC9 320 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 EFCAB8A8MWE9 144 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 PRAMEF2O60811 474 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 RASAL1O95294 804 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 CLDN1O95832 211 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 CRYABP02511 175 aaKnown RBP17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 JAK1P23458 1154 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 FRG1Q14331 258 aaKnown RBP17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 CATSPEREQ5SY80 951 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 FRA10AC1Q70Z53 315 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 ABHD13Q7L211 337 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 NKAPQ8N5F7 415 aaKnown RBP17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 ZNF740Q8NDX6 193 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 OR4K1Q8NGD4 311 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 NEIL2Q969S2 332 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 PDLIM5Q96HC4 596 aaKnown RBP17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 VPS39Q96JC1 886 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 ZNF354BQ96LW1 612 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 OR4K3Q96R72 315 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 NSMCE4AQ9NXX6 385 aa17.4■□□□□ 0.38
AC004540.1-201ENST00000439120 A0A1B0GUH1 482 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 FAM95CA0A1B0GW59 222 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 URADA6NGE7 173 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 ZNF37AP17032 561 aaPredicted RBP17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 ALOX12P18054 663 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 COL8A1P27658 744 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 DEFB134Q4QY38 66 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 SFT2D3Q587I9 215 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 PAPD4Q6PIY7 484 aaKnown RBP17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 SBSNQ6UWP8 590 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 TMPRSS11BQ86T26 416 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 THOC6Q86W42 341 aaKnown RBP17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 FBXO36Q8NEA4 188 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 OR5T3Q8NGG3 340 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 NR4A3Q92570 626 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 MOCOSQ96EN8 888 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 TAAR6Q96RI8 345 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 LPAR4Q99677 370 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 AIF1LQ9BQI0 150 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 WDR83Q9BRX9 315 aaKnown RBP17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 SARGQ9BW04 601 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 ZFP69BQ9UJL9 534 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 KCNE2Q9Y6J6 123 aa17.39■□□□□ 0.37
AC004540.1-201ENST00000439120 NPEPPSL1A6NEC2 478 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 GALR3O60755 368 aaPredicted RBP17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 FHP07954 510 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 ZNF888P0CJ79 500 aaPredicted RBP17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 AHRP35869 848 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 SCTRP47872 440 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 SLC12A2P55011 1212 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 OR4D2P58180 307 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 TAS2R50P59544 299 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 ZXDCQ2QGD7 858 aaPredicted RBP17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 ACER2Q5QJU3 275 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 FCRLBQ6BAA4 426 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 GFRALQ6UXV0 394 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 ZC3HC1Q86WB0 502 aaKnown RBP17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 SHISA5Q8N114 240 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 AMER2Q8N7J2 671 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 DNAJB8Q8NHS0 232 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 M1APQ8TC57 530 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 NT5CQ8TCD5 201 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 TBC1D20Q96BZ9 403 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 PELI2Q9HAT8 420 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 PSAT1Q9Y617 370 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 SCN2AQ99250 2005 aa17.38■□□□□ 0.37
AC004540.1-201ENST00000439120 NBPF19A0A087WUL8 3843 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 MAGEB17A8MXT2 336 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 PSMD12O00232 456 aaPredicted RBP17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 CDC7O00311 574 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 STSP08842 583 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 HNMTP50135 292 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 KCNK10P57789 538 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 OLR1P78380 273 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 RHAGQ02094 409 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ZNF460Q14592 562 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 FASTKD3Q14CZ7 662 aaKnown RBP17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 RBBP5Q15291 538 aaKnown RBP17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 MEP1AQ16819 746 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 PPP1R3AQ16821 1122 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ZNF766Q5HY98 468 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ZNF324BQ6AW86 544 aaPredicted RBP17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ZNF787Q6DD87 383 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 TMEM207Q6UWW9 146 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 CAPN12Q6ZSI9 719 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ADAMTSL2Q86TH1 951 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 FJX1Q86VR8 437 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ZBED8Q8IZ13 594 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 BEST3Q8N1M1 668 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 AFAP1L2Q8N4X5 818 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 SLC5A8Q8N695 610 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 BBOF1Q8ND07 529 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 PLPP5Q8NEB5 264 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 TRPV3Q8NET8 790 aa17.37■□□□□ 0.37
AC004540.1-201ENST00000439120 ANKRD7Q92527 254 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms