RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 MBD3O95983 291 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ALDOAP04075 364 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANKRD34CP0C6C1 535 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM225BP0DP42 221 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SPP1P10451 314 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PNMTP11086 282 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF182P17025 639 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 NAGAP17050 411 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ITGALP20701 1170 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 HNF1AP20823 631 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 S1PR1P21453 382 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPD1P21695 349 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TGM2P21980 687 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 UGT1A1P22309 533 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 EEF1B2P24534 225 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 HTR2AP28223 471 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ADORA2AP29274 412 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 EPHA3P29320 983 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PPP2R1AP30153 589 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHI3L1P36222 383 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 FDFT1P37268 417 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SPAM1P38567 509 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 BCAP31P51572 246 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPR143P51810 404 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 RWDD2BP57060 319 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CLRN1P58418 232 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 DAOAP59103 153 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GPX6P59796 221 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 HSD11B2P80365 405 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CSTF1Q05048 431 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 NCBP1Q09161 790 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 HSPB3Q12988 150 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 DMP1Q13316 513 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GK2Q14410 553 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PON2Q15165 354 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANGPT1Q15389 498 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SHBQ15464 509 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 RGS21Q2M5E4 152 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ALKBH6Q3KRA9 238 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 HSDL1Q3SXM5 330 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PAGE2BQ5JRK9 111 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 LRRC73Q5JTD7 316 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PCID2Q5JVF3 399 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SAPCD1Q5SSQ6 148 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM63BQ5T3F8 832 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TTC23Q5W5X9 447 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 WSCD1Q658N2 575 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ACSM6Q6P461 480 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 FBXO46Q6PJ61 603 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 BLOC1S2Q6QNY1 142 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 SASS6Q6UVJ0 657 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 LAYNQ6UX15 382 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 KCTD8Q6ZWB6 473 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 NDUFAF7Q7L592 441 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 BHLHA15Q7RTS1 189 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PRSS45Q7RTY3 260 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRPM8Q7Z2W7 1104 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 LINC00523Q86TU6 105 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CDKL3Q8IVW4 592 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GCNT2Q8N0V5 402 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM86B1Q8N7N1 296 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM47BQ8NA70 645 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF397Q8NF99 534 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR13F1Q8NGS4 319 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR14L1PQ8NHC6 308 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRPC4APQ8TEL6 797 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ATL1Q8WXF7 558 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 RAB1CQ92928 201 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 EMG1Q92979 244 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 REPS1Q96D71 796 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHMP6Q96FZ7 201 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 PDLIM2Q96JY6 352 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CPNE1Q99829 537 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM43Q9BTV4 400 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GTPBP2Q9BX10 602 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ADGRE3Q9BY15 652 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANKRD60Q9BZ19 345 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 MFFQ9GZY8 342 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 OR52A5Q9H2C5 316 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 MTIF3Q9H2K0 278 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GEMIN7Q9H840 131 aaKnown RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 LRRC4Q9HBW1 653 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHRAC1Q9NRG0 131 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF275Q9NSD4 429 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 AHSPQ9NZD4 102 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 IL37Q9NZH6 218 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GCNT4Q9P109 453 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 UPB1Q9UBR1 384 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 STEAP1Q9UHE8 339 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CYTH4Q9UIA0 394 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 GGA2Q9UJY4 613 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TBC1D24Q9ULP9 559 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CHMP2BQ9UQN3 213 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 CFL2Q9Y281 166 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 RHBDD3Q9Y3P4 386 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 TIMM22Q9Y584 194 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 MAU2Q9Y6X3 613 aa3.45□□□□□ -1.86
HMGB1P12-201ENST00000438594 UTYO14607 1347 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 ZNF541Q9H0D2 1346 aa3.44□□□□□ -1.86
HMGB1P12-201ENST00000438594 HEG1Q9ULI3 1381 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms