RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 NSUN5Q96P11 429 aaKnown RBP11.63□□□□□ -0.55
PTPRF-208ENST00000437607 GPR87Q9BY21 358 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 SLCO1B3Q9NPD5 702 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 SEMA4BQ9NPR2 832 aaPredicted RBP11.63□□□□□ -0.55
PTPRF-208ENST00000437607 ACSS2Q9NR19 701 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 FGF21Q9NSA1 209 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 ABCF3Q9NUQ8 709 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 PLEKHB1Q9UF11 243 aaPredicted RBP11.63□□□□□ -0.55
PTPRF-208ENST00000437607 DYRK1BQ9Y463 629 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 MAP4K5Q9Y4K4 846 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 ASB1Q9Y576 335 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 ZGRF1Q86YA3 2104 aa11.63□□□□□ -0.55
PTPRF-208ENST00000437607 OR5K3A6NET4 321 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 TLCD2A6NGC4 264 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 ARGFXA6NJG6 315 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 TTLL8A6PVC2 850 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 EDF1O60869 148 aaKnown RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 SEMA7AO75326 666 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 VPS4BO75351 444 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 OTCP00480 354 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CHRNGP07510 517 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CCNG1P51959 295 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CDH13P55290 713 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 PKNOX1P55347 436 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 ACY1Q03154 408 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 GALNT1Q10472 559 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CDC16Q13042 620 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 GRB7Q14451 532 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 GPR19Q15760 415 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CYP2A13Q16696 494 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 ARL13AQ5H913 290 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 LCN10Q6JVE6 187 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CYB5D1Q6P9G0 228 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 GPRIN3Q6ZVF9 776 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 SYVN1Q86TM6 617 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CUZD1Q86UP6 607 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 THOC6Q86W42 341 aaKnown RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 BPHLQ86WA6 291 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 KMT5CQ86Y97 462 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 KLHDC8AQ8IYD2 350 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 OR6Y1Q8NGX8 325 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 OR2L8Q8NGY9 312 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 OR56A3Q8NH54 315 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 TRPC4APQ8TEL6 797 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 ZFPM2Q8WW38 1151 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 THAP4Q8WY91 577 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 PYCR2Q96C36 320 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 PPM1MQ96MI6 270 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 ZNF382Q96SR6 550 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 PITPNM3Q9BZ71 974 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 XKR8Q9H6D3 395 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 MID1IP1Q9NPA3 183 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 VPS4AQ9UN37 437 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 ICKQ9UPZ9 632 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 FARSAQ9Y285 508 aaKnown RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 RAP2CQ9Y3L5 183 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 PCDHGA9Q9Y5G4 932 aaKnown RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 CREBBPQ92793 2442 aa11.62□□□□□ -0.55
PTPRF-208ENST00000437607 DIDO1Q9BTC0 2240 aaKnown RBP11.62□□□□□ -0.55
PTPRF-208ENST00000437607 GMNCA6NCL1 334 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 E7ENX8 843 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CLGNO14967 610 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 ITM2AO43736 263 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CPNE3O75131 537 aaKnown RBP11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SCRG1O75711 98 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CEACAM4O75871 244 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 AGFG2O95081 481 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CCNDBP1O95273 360 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 TSPAN8P19075 237 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 GDF5P43026 501 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CCL11P51671 97 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 PGDP52209 483 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 HK2P52789 917 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 HSD11B2P80365 405 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 TAP2Q03519 686 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SH2D4BQ5SQS7 431 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 FHL5Q5TD97 284 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 PRAMEF17Q5VTA0 474 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 FAM69BQ5VUD6 431 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CES4AQ5XG92 561 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 CPLX4Q7Z7G2 160 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 TMPRSS11BQ86T26 416 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 AMIGO1Q86WK6 493 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 MYLK4Q86YV6 388 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-208ENST00000437607 Q8NA96 180 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 AGR3Q8TD06 166 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 AGAP11Q8TF27 550 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 ZNF317Q96PQ6 595 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SORT1Q99523 831 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 MIPEPQ99797 713 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 HAUS8Q9BT25 410 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SLC25A23Q9BV35 468 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SGPP1Q9BX95 441 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SHCBP1LQ9BZQ2 653 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 ILKAPQ9H0C8 392 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-208ENST00000437607 PCBD2Q9H0N5 130 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 ING2Q9H160 280 aa11.61□□□□□ -0.55
PTPRF-208ENST00000437607 SRMSQ9H3Y6 488 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms