RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NDUFS4O43181 175 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 GP1BAP07359 652 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 ACPPP15309 386 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 MAPK1P28482 360 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 ADSLP30566 484 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 ACSM2AQ08AH3 577 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 PWP1Q13610 501 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 SQLEQ14534 574 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 IL23RQ5VWK5 629 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 ACSM2BQ68CK6 577 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 PRSS42Q7Z5A4 293 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 SLC13A3Q8WWT9 602 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 TM4SF19Q96DZ7 209 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 FCRL1Q96LA6 429 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 CENPKQ9BS16 269 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 CCDC106Q9BWC9 280 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 MRPL1Q9BYD6 325 aaKnown RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 SIRT5Q9NXA8 310 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 AHSPQ9NZD4 102 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 TMEM9Q9P0T7 183 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 ARMCX1Q9P291 453 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 RUVBL1Q9Y265 456 aaKnown RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 POLR3HQ9Y535 204 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 DLL1O00548 723 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 TOX3O15405 576 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 MAP3K7O43318 606 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 SLC35G6P0C7Q6 338 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 DIO3P55073 304 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 STX1BP61266 288 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 ADPRMQ3LIE5 342 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 FOXR1Q6PIV2 292 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 METTL4Q8N3J2 472 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 DNAJC22Q8N4W6 341 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 NT5CQ8TCD5 201 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 RERGQ96A58 199 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 C11orf24Q96F05 449 aaPredicted RBP21.97■■□□□ 1.11
CPSF4-204ENST00000436336 PDE7BQ9NP56 450 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 GPR45Q9Y5Y3 372 aa21.97■■□□□ 1.11
CPSF4-204ENST00000436336 LRIT2A6NDA9 550 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 C4orf47A7E2U8 309 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 CASC3O15234 703 aaKnown RBP21.96■■□□□ 1.11
CPSF4-204ENST00000436336 SLC22A2O15244 555 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 SH3BP5O60239 455 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 MYO1DO94832 1006 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 MRPL19P49406 292 aaKnown RBP21.96■■□□□ 1.11
CPSF4-204ENST00000436336 RGS1Q08116 209 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 HYAL2Q12891 473 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 TMEM35AQ53FP2 167 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 FRMPD2BQ6IN97 320 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 KMT5CQ86Y97 462 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 C1orf52Q8N6N3 182 aaKnown RBP21.96■■□□□ 1.11
CPSF4-204ENST00000436336 CAMKVQ8NCB2 501 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 F2RL3Q96RI0 385 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 BRINP2Q9C0B6 783 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 SLC6A16Q9GZN6 736 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 REXO4Q9GZR2 422 aaKnown RBP21.96■■□□□ 1.11
CPSF4-204ENST00000436336 SOHLH2Q9NX45 425 aa21.96■■□□□ 1.11
CPSF4-204ENST00000436336 ATXN7L1Q9ULK2 861 aaPredicted RBP21.96■■□□□ 1.11
CPSF4-204ENST00000436336 PROB1E7EW31 1015 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 H0YGG7 62 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 SAP18O00422 153 aaKnown RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 HNRNPH1P31943 449 aaKnown RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 MLLT3P42568 568 aaPredicted RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 ARFIP1P53367 373 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 ARF3P61204 181 aaPredicted RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 STXBP1P61764 594 aaKnown RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 RPS6KA2Q15349 733 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 NOXRED1Q6NXP6 359 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 GALNT18Q6P9A2 607 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 ZNF655Q8N720 491 aaPredicted RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 OR4D9Q8NGE8 314 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 SDR39U1Q9NRG7 319 aaPredicted RBP21.95■■□□□ 1.1
CPSF4-204ENST00000436336 PDP2Q9P2J9 529 aa21.95■■□□□ 1.1
CPSF4-204ENST00000436336 LOC105369274A0A096LPK9 316 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 LOC102723532A0A0G2JNH3 316 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 PRPS2P11908 318 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 PCSK2P16519 638 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 RAP1GDS1P52306 607 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 HSD11B2P80365 405 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 ZSCAN26Q16670 478 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 PDCD4Q53EL6 469 aaKnown RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 SNAP47Q5SQN1 464 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 MANEAQ5SRI9 462 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 OR4N4Q8N0Y3 316 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 MIER2Q8N344 545 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 RGMAQ96B86 450 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 HCN4Q9Y3Q4 1203 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 CAPN7Q9Y6W3 813 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 CAPN14A8MX76 684 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 PLPP1O14494 284 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 SRPX2O60687 465 aaPredicted RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 CBFA2T3O75081 653 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 STATHP02808 62 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 G6PDP11413 515 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 BCKDHAP12694 445 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 KLF10Q13118 480 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 TOR1AIP1Q5JTV8 583 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 CYP20A1Q6UW02 462 aa21.94■■□□□ 1.1
CPSF4-204ENST00000436336 ZNF574Q6ZN55 896 aaPredicted RBP21.94■■□□□ 1.1
CPSF4-204ENST00000436336 TMPRSS9Q7Z410 1059 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms