RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 LRTM1Q9HBL6 345 aa9.44□□□□□ -0.9
AC004448.3-201ENST00000435953 C1orf109Q9NX04 203 aa9.44□□□□□ -0.9
AC004448.3-201ENST00000435953 AHSPQ9NZD4 102 aa9.44□□□□□ -0.9
AC004448.3-201ENST00000435953 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
AC004448.3-201ENST00000435953 PCDHGA1Q9Y5H4 931 aa9.44□□□□□ -0.9
AC004448.3-201ENST00000435953 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
AC004448.3-201ENST00000435953 ZFC3H1O60293 1989 aaKnown RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 TXNDC9O14530 226 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 TM4SF5O14894 197 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 UBDO15205 165 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 EIF2S1P05198 315 aaKnown RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 ANKRD34CP0C6C1 535 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 THRAP10827 490 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 VSX2P58304 361 aaPredicted RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 GABPB1Q06547 395 aaPredicted RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 RGS1Q08116 209 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 TBL3Q12788 808 aaKnown RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 HYAL2Q12891 473 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 TRA2AQ13595 282 aaKnown RBP eCLIP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 SPIDRQ14159 915 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 ADPRMQ3LIE5 342 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 GALNTL6Q49A17 601 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 ATP6AP1LQ52LC2 224 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 WASHC2DQ5SRD0 308 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 KHDRBS2Q5VWX1 349 aaKnown RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 OGFOD2Q6N063 350 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 UBE3DQ7Z6J8 389 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 MTDHQ86UE4 582 aaKnown RBP9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 ZFAND4Q86XD8 727 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 SLITRK4Q8IW52 837 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 PARP9Q8IXQ6 854 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 METTL4Q8N3J2 472 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 RGMAQ96B86 450 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 APIPQ96GX9 242 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 CCDC74BQ96LY2 380 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 ZNF285Q96NJ3 590 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 KLHL31Q9H511 634 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 SOHLH2Q9NX45 425 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 SIRT5Q9NXA8 310 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 GIMAP2Q9UG22 337 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 RAPGEFL1Q9UHV5 662 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 TRIM33Q9UPN9 1127 aa9.43□□□□□ -0.9
AC004448.3-201ENST00000435953 D6RAR5 112 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 E9PBE3 544 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SAP18O00422 153 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ZSCAN9O15535 394 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 NDUFS4O43181 175 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 KLHL41O60662 606 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CCDC22O60826 627 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 RFPL3O75679 317 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SEMA3DO95025 777 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 STATHP02808 62 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CTSBP07858 339 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 MSL3P1P0C860 447 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SMIM10L1P0DMW3 83 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CDK4P11802 303 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 FOLR1P15328 257 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 NCF2P19878 526 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CSRP1P21291 193 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 HNRNPH1P31943 449 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 MLLT3P42568 568 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ARFIP1P53367 373 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 STXBP1P61764 594 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ERVK-8P63133 956 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 MAD2L1Q13257 205 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 KCNAB1Q14722 419 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 PRTGQ2VWP7 1150 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 DEFB110Q30KQ9 67 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CCDC157Q569K6 752 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 TOR1AIP1Q5JTV8 583 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 TCTE1Q5JU00 501 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 PHF19Q5T6S3 580 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 IL23RQ5VWK5 629 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 TMEM198Q66K66 360 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 OR4C11Q6IEV9 310 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 NOXRED1Q6NXP6 359 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ABHD17CQ6PCB6 329 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SLCO6A1Q86UG4 719 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 KIAA2013Q8IYS2 634 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CPSF7Q8N684 471 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ZNF655Q8N720 491 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CSNK1A1LQ8N752 337 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 FNDC5Q8NAU1 212 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 KCT2Q8NC54 265 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SRFBP1Q8NEF9 429 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 DEFB124Q8NES8 71 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 N4BP2L2Q92802 583 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 MS4A6EQ96DS6 147 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 C11orf24Q96F05 449 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SMIM10Q96HG1 83 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 CENPKQ9BS16 269 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 MRPL1Q9BYD6 325 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 NLNQ9BYT8 704 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 REXO4Q9GZR2 422 aaKnown RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 AICDAQ9GZX7 198 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 SPRTNQ9H040 489 aaPredicted RBP9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 ENAMQ9NRM1 1142 aa9.42□□□□□ -0.9
AC004448.3-201ENST00000435953 TOR4AQ9NXH8 423 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms