RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 EMP2P54851 167 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 IRF9Q00978 393 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 TUBB8Q3ZCM7 444 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 TEX35Q5T0J7 233 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 ABHD13Q7L211 337 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 LRRC70Q7Z2Q7 622 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 SNX31Q8N9S9 440 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 ANKRD53Q8N9V6 530 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 LRRN4CLQ8ND94 238 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 UBTD2Q8WUN7 234 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 DCAKDQ8WVC6 231 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 CD244Q9BZW8 370 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 VPS11Q9H270 941 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 NT5DC2Q9H857 520 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 MLXIPLQ9NP71 852 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 ATP13A2Q9NQ11 1180 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 GPR83Q9NYM4 423 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 ANAPC2Q9UJX6 822 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 ZNF451Q9Y4E5 1061 aa15.41■□□□□ 0.06
SMPD4-207ENST00000435455 TNRC6AQ8NDV7 1962 aaKnown RBP15.41■□□□□ 0.06
SMPD4-207ENST00000435455 RIPK2O43353 540 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 KLHL18O94889 574 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 SERPINA6P08185 405 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 CYC1P08574 325 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 SNRPAP09012 282 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 FAM153BP0C7A2 387 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 ACPPP15309 386 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 ALOX12P18054 663 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 VARSP26640 1264 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 MAGEA12P43365 314 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 SNRPNP63162 240 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 AIMP2Q13155 320 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 SLBPQ14493 270 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 FAM153CQ494X1 144 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 FBXO48Q5FWF7 155 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 LGSNQ5TDP6 509 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 KIRREL2Q6UWL6 708 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 TMIGD1Q6UXZ0 262 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 PRSS41Q7RTY9 318 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 PRICKLE2Q7Z3G6 844 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 PTRH1Q86Y79 214 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 HPS6Q86YV9 775 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 ZC3H7AQ8IWR0 971 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 CNPY4Q8N129 248 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 GALNT16Q8N428 558 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 AFAP1L2Q8N4X5 818 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 OR11G2Q8NGC1 345 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 ESAMQ96AP7 390 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 MOCOSQ96EN8 888 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 PTCD3Q96EY7 689 aaKnown RBP15.4■□□□□ 0.06
SMPD4-207ENST00000435455 EFCAB11Q9BUY7 163 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 COPG2Q9UBF2 871 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 OPTCQ9UBM4 332 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 NAALAD2Q9Y3Q0 740 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 DOCK10Q96BY6 2186 aa15.4■□□□□ 0.06
SMPD4-207ENST00000435455 PRRC2CQ9Y520 2896 aaKnown RBP15.39■□□□□ 0.05
SMPD4-207ENST00000435455 A6NL46 340 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 TRIM49D1C9J1S8 452 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 K7EM74 188 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 K7EPI3 171 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 SGK494L7N484 410 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 MAP2K7O14733 419 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 FFAR3O14843 346 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 GPR42O15529 346 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 SUV39H1O43463 412 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 SLC28A2O43868 658 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 RDH16O75452 317 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 BMP10O95393 424 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 COL6A2P12110 1019 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 NR1D1P20393 614 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 IL10P22301 178 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 CASP2P42575 452 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 XCR1P46094 333 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 GLRBP48167 497 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 SOX8P57073 446 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 KLRB1Q12918 225 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 LAPTM5Q13571 262 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 MYBPC3Q14896 1274 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 TBCCQ15814 346 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 SYT16Q17RD7 645 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 TSNAXIP1Q2TAA8 658 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 XKR6Q5GH73 641 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 VWA5B1Q5TIE3 1220 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 ATG14Q6ZNE5 492 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 LAPTM4BQ86VI4 370 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 PDSS2Q86YH6 399 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 FDCSPQ8NFU4 85 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 OR51Q1Q8NH59 317 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 WDR34Q96EX3 536 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 GPR78Q96P69 363 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 TXLNGYQ9BZA5 131 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 SLC6A16Q9GZN6 736 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 CLK4Q9HAZ1 481 aaKnown RBP15.39■□□□□ 0.05
SMPD4-207ENST00000435455 HCN3Q9P1Z3 774 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 MKL2Q9ULH7 1088 aa15.39■□□□□ 0.05
SMPD4-207ENST00000435455 ANKDD1BA6NHY2 528 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 GALR3O60755 368 aaPredicted RBP15.38■□□□□ 0.05
SMPD4-207ENST00000435455 ALPPP05187 535 aa15.38■□□□□ 0.05
SMPD4-207ENST00000435455 RBP1P09455 135 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms