RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 DOC2AQ14183 400 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 SLBPQ14493 270 aaKnown RBP eCLIP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 BORAQ6PGQ7 559 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 TMIGD1Q6UXZ0 262 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 TMEM151BQ8IW70 566 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 CYP4X1Q8N118 509 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 KRT78Q8N1N4 520 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 TTLQ8NG68 377 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 EPS8L3Q8TE67 593 aaKnown RBP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 SCYL1Q96KG9 808 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 EFCAB11Q9BUY7 163 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 SLC6A16Q9GZN6 736 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 CPSF2Q9P2I0 782 aaKnown RBP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 NXT1Q9UKK6 140 aaKnown RBP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 ZNF490Q9ULM2 529 aaPredicted RBP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 PTRH2Q9Y3E5 179 aaKnown RBP17.44■□□□□ 0.38
HLA-F-220ENST00000434407 MAP4K5Q9Y4K4 846 aa17.44■□□□□ 0.38
HLA-F-220ENST00000434407 A0A0A6YYC8 382 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 A0A1W2PPM1 405 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 LRRC14BA6NHZ5 514 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 I3L1I5 382 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 NDUFS4O43181 175 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 SMIM10L1P0DMW3 83 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 PYGBP11216 843 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 EPB42P16452 691 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 FBLP22087 321 aaKnown RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 FOLR3P41439 243 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 SLCO1A2P46721 670 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 FOXL2P58012 376 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 CHIT1Q13231 466 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 LAPTM5Q13571 262 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 RBBP5Q15291 538 aaKnown RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 DEFB109BQ30KR1 87 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 XKR6Q5GH73 641 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 PRSS41Q7RTY9 318 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 COL26A1Q96A83 441 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 NACC2Q96BF6 587 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 MMABQ96EY8 250 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 SMIM10Q96HG1 83 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 BBC3Q96PG8 261 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 TGIF2Q9GZN2 237 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 AICDAQ9GZX7 198 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 RHBGQ9H310 441 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 TMEM216Q9P0N5 145 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 ZNF282Q9UDV7 671 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-220ENST00000434407 KCNMB2Q9Y691 235 aa17.43■□□□□ 0.38
HLA-F-220ENST00000434407 CFAP46Q8IYW2 2715 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 CNTRLQ7Z7A1 2325 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 E2F3O00716 465 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 SIX3O95343 332 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 TBX6O95947 436 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 AVPR1BP47901 424 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 IRF8Q02556 426 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 RGS1Q08116 209 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 HERC3Q15034 1050 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 VN1R5Q7Z5H4 357 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 PDSS2Q86YH6 399 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 APLFQ8IW19 511 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 TEX9Q8N6V9 391 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 PTGR2Q8N8N7 351 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 OR9A4Q8NGU2 314 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 OR2W6PQ8NHA6 318 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 STT3BQ8TCJ2 826 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 APOBEC4Q8WW27 367 aaKnown RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 PHF21BQ96EK2 531 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 IP6K3Q96PC2 410 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 C1QTNF3Q9BXJ4 246 aa17.42■□□□□ 0.38
HLA-F-220ENST00000434407 ROPN1BQ9BZX4 212 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 ROPN1Q9HAT0 212 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 MKKSQ9NPJ1 570 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 RALYQ9UKM9 306 aaKnown RBP17.42■□□□□ 0.38
HLA-F-220ENST00000434407 FOXO6A8MYZ6 492 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 GOLGA8RI6L899 631 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 UGDHO60701 494 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 SMIM24O75264 130 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 CLEC3AO75596 197 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 ZGLP1P0C6A0 271 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 ALOX12P18054 663 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 IL1RNP18510 177 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 PIK3CGP48736 1102 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 OCA2Q04671 838 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 GTF2H2Q13888 395 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 ADPRMQ3LIE5 342 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 SOWAHCQ53LP3 525 aaPredicted RBP17.41■□□□□ 0.38
HLA-F-220ENST00000434407 PAGE2BQ5JRK9 111 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 GTF2H2CQ6P1K8 395 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 GOLGA7Q7Z5G4 137 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 RAB43Q86YS6 212 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 LAS2Q8IYD9 372 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 RIBC1Q8N443 379 aaPredicted RBP17.41■□□□□ 0.38
HLA-F-220ENST00000434407 EXD3Q8N9H8 876 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 ZCCHC10Q8TBK6 192 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 UTP15Q8TED0 518 aaKnown RBP17.41■□□□□ 0.38
HLA-F-220ENST00000434407 TMEM109Q9BVC6 243 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 ANKHQ9HCJ1 492 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 C14orf105Q9NVL8 296 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 DCDC2Q9UHG0 476 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 LGALS13Q9UHV8 139 aa17.41■□□□□ 0.38
HLA-F-220ENST00000434407 PCTPQ9UKL6 214 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms