RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PKP4Q99569 1192 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 CDADC1Q9BWV3 514 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 FBLP22087 321 aaKnown RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 SLC6A2P23975 617 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 PRLHRP49683 370 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 CCR5P51681 352 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 WSCD2Q2TBF2 565 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 Q6ZS52 159 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 GK5Q6ZS86 529 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 OR5AR1Q8NGP9 310 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 MMABQ96EY8 250 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 CNOT6Q9ULM6 557 aaKnown RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 OR52A4PA6NMU1 304 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 DBTP11182 482 aaKnown RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 ACSL1P33121 698 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 DCDC1P59894 354 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 CAMK1Q14012 370 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 C10orf62Q5T681 223 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 AFMIDQ63HM1 303 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 GALNT5Q7Z7M9 940 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 METTL27Q8N6F8 245 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-207ENST00000429896 EGFL7Q9UHF1 273 aa12.47□□□□□ -0.41
PTCH1-207ENST00000429896 CSNK2A2P19784 350 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-207ENST00000429896 HMGCS1Q01581 520 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 CDKN3Q16667 212 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SUN3Q8TAQ9 357 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 ARHGAP9Q9BRR9 750 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 U3KQV3 271 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 B4GALT2O60909 372 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 OR5F1O95221 314 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 HBQ1P09105 142 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 TPP2P29144 1249 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-207ENST00000429896 AGTR2P50052 363 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 CEBPGP53567 150 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 DNAJB13P59910 316 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
PTCH1-207ENST00000429896 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 GALNTL5Q7Z4T8 443 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 CSNK1A1LQ8N752 337 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 LRIT1Q9P2V4 623 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 TMEM221A6NGB7 291 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 M0R296 226 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SCGNO76038 276 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 CREB1P16220 341 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 ACY1Q03154 408 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PIGWQ7Z7B1 504 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SVOPQ8N4V2 548 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 NATD1Q8N6N6 113 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 KAT2AQ92830 837 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 RCN3Q96D15 328 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SLC12A9Q9BXP2 914 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 OR51B5Q9H339 312 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 EPS8L2Q9H6S3 715 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PLXNA1Q9UIW2 1896 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 IKZF3Q9UKT9 509 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 DOCK5Q9H7D0 1870 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 EME2A4GXA9 379 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-207ENST00000429896 AP1G1O43747 822 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SSNA1O43805 119 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 OR10H3O60404 316 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PRLP01236 227 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 MAGP20916 626 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 NRG3P56975 720 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PERM1Q5SV97 790 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 FIGLAQ6QHK4 219 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PIANPQ8IYJ0 282 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 OR13H1Q8NG92 308 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PDFQ9HBH1 243 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 TMED5Q9Y3A6 229 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 MAP4K5Q9Y4K4 846 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 PRSS21Q9Y6M0 314 aa12.46□□□□□ -0.41
PTCH1-207ENST00000429896 SLC35E2BP0CK96 405 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 C5orf22Q49AR2 442 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 GLB1L3Q8NCI6 653 aaPredicted RBP12.46□□□□□ -0.42
PTCH1-207ENST00000429896 OR13J1Q8NGT2 312 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 DUSP26Q9BV47 211 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 GPRC5BQ9NZH0 403 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 CPNE7Q9UBL6 633 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 TRPS1Q9UHF7 1281 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 SLC6A14Q9UN76 642 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 A0A075B6Q4 140 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 NUAK1O60285 661 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 MTHFD1P11586 935 aaKnown RBP12.46□□□□□ -0.42
PTCH1-207ENST00000429896 F3P13726 295 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 TAS2R41P59536 307 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 KIAA1024LP59773 190 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 ERVK-8P63133 956 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 CBFBQ13951 182 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 DPY19L1Q2PZI1 675 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 NXPE4Q6UWF7 544 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM150AQ86TG1 271 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 PLD6Q8N2A8 252 aaKnown RBP12.46□□□□□ -0.42
PTCH1-207ENST00000429896 XAGE5Q8WWM1 108 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 TBC1D10AQ9BXI6 508 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 TMEM184CQ9NVA4 438 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 EPHA6Q9UF33 1036 aa12.46□□□□□ -0.42
PTCH1-207ENST00000429896 PSMG1O95456 288 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms