RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TOR1AIP1Q5JTV8 583 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 PLA2G2CQ5R387 149 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 KHDRBS2Q5VWX1 349 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 REP15Q6BDI9 236 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ZCCHC8Q6NZY4 707 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 ZNF793Q6ZN11 406 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 RNF44Q7L0R7 432 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 ASRGL1Q7L266 308 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 TMPRSS9Q7Z410 1059 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 COMMD6Q7Z4G1 85 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 OR4N4Q8N0Y3 316 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 MMP21Q8N119 569 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 METTL4Q8N3J2 472 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 DTWD1Q8N5C7 304 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 MINDY1Q8N5J2 469 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 EFCAB3Q8N7B9 438 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 AVL9Q8NBF6 648 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 CDC26Q8NHZ8 85 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 CEP76Q8TAP6 659 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 BAHD1Q8TBE0 780 aaPredicted RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 GFM2Q969S9 779 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 UBE2E3Q969T4 207 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 UTP4Q969X6 686 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 VPS33AQ96AX1 596 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 TGM7Q96PF1 710 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 SARGQ9BW04 601 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 PFDN4Q9NQP4 134 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 RXFP3Q9NSD7 469 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 TXLNGQ9NUQ3 528 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 TAS2R1Q9NYW7 299 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 KLHL3Q9UH77 587 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 PADI4Q9UM07 663 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 SNX7Q9UNH6 387 aa8.48□□□□□ -1.05
SMC6-204ENST00000428868 MRPS2Q9Y399 296 aaKnown RBP8.48□□□□□ -1.05
SMC6-204ENST00000428868 IGHV5-51A0A0C4DH38 117 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 LNP1A1A4G5 178 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 B2RBV5 119 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 AIM2O14862 343 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 SLC22A2O15244 555 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CAPN5O15484 640 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 AKAP10O43572 662 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 NUDT21O43809 227 aaKnown RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 PCDH7O60245 1069 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CLEC3AO75596 197 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 SLC22A3O75751 556 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 MED26O95402 600 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CER1O95813 267 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CDH3P22223 829 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CD1CP29017 333 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 TPP2P29144 1249 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 PRDX6P30041 224 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 BSGP35613 385 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 DPP6P42658 865 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 PPM1FP49593 454 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 PHC1P78364 1004 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 MC1RQ01726 317 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ACSM2AQ08AH3 577 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 BIRC2Q13490 618 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CYLC2Q14093 348 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 HKDC1Q2TB90 917 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 AMZ1Q400G9 498 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 VPS26BQ4G0F5 336 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 TIGD2Q4W5G0 525 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ZNF385BQ569K4 471 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 PAGE3Q5JUK9 113 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 DEPDC1Q5TB30 811 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ACSM2BQ68CK6 577 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ANKRD26P1Q6NSI1 321 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ARMC6Q6NXE6 501 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 PRR23CQ6ZRP0 262 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 SPRED1Q7Z699 444 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 C19orf47Q8N9M1 422 aaKnown RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 SUMF1Q8NBK3 374 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 KCT2Q8NC54 265 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ZCCHC10Q8TBK6 192 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 NCSTNQ92542 709 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ATOH1Q92858 354 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 UCN3Q969E3 161 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 SLC22A18Q96BI1 424 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 TMEM74Q96NL1 305 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 OR2A5Q96R48 311 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 SERPINI1Q99574 410 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 NUDT22Q9BRQ3 303 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CADM1Q9BY67 442 aaKnown RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 PITHD1Q9GZP4 211 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 IRF2BPLQ9H1B7 796 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 LRMDAQ9H2I8 198 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 SEMA6CQ9H3T2 930 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 PACSIN3Q9UKS6 424 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ATXN7L1Q9ULK2 861 aaPredicted RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 EXO1Q9UQ84 846 aaKnown RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 EIF3LQ9Y262 564 aaKnown RBP8.47□□□□□ -1.05
SMC6-204ENST00000428868 KLK4Q9Y5K2 254 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 ENTPD2Q9Y5L3 495 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 AP1M2Q9Y6Q5 423 aa8.47□□□□□ -1.05
SMC6-204ENST00000428868 CACNA1HO95180 2353 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms