RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ASPGQ86U10 573 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 TRIM58Q8NG06 486 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 SLC13A3Q8WWT9 602 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 KCNJ9Q92806 393 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 MTFMTQ96DP5 389 aaKnown RBP15.56■□□□□ 0.08
VARS-216ENST00000428445 FRMD6Q96NE9 622 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 AARSD1Q9BTE6 412 aaKnown RBP15.56■□□□□ 0.08
VARS-216ENST00000428445 MMP25Q9NPA2 562 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 SAMD15Q9P1V8 674 aa15.56■□□□□ 0.08
VARS-216ENST00000428445 ANKRD17O75179 2603 aaKnown RBP15.56■□□□□ 0.08
VARS-216ENST00000428445 CTAGE15A4D2H0 777 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 ASNA1O43681 348 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 SP1P08047 785 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 CYC1P08574 325 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 CD46P15529 392 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 AGTR2P50052 363 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 OR4D2P58180 307 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 USP10Q14694 798 aaKnown RBP15.55■□□□□ 0.08
VARS-216ENST00000428445 HSP90AA5PQ58FG0 334 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 AGTRAPQ6RW13 159 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 Q6ZPB1 254 aaPredicted RBP15.55■□□□□ 0.08
VARS-216ENST00000428445 FGD2Q7Z6J4 655 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 CTAGE6Q86UF2 777 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 SIAH3Q8IW03 269 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 CHERPQ8IWX8 916 aaKnown RBP15.55■□□□□ 0.08
VARS-216ENST00000428445 CPSF7Q8N684 471 aaKnown RBP15.55■□□□□ 0.08
VARS-216ENST00000428445 CAMKVQ8NCB2 501 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 PLPP5Q8NEB5 264 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 THAP3Q8WTV1 239 aaPredicted RBP15.55■□□□□ 0.08
VARS-216ENST00000428445 PYCR2Q96C36 320 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 MS4A14Q96JA4 679 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 SERPINB12Q96P63 405 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 IARS2Q9NSE4 1012 aaKnown RBP15.55■□□□□ 0.08
VARS-216ENST00000428445 LRFN1Q9P244 771 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 FBXO5Q9UKT4 447 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 COMMD10Q9Y6G5 202 aa15.55■□□□□ 0.08
VARS-216ENST00000428445 ASPDHA6ND91 283 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 A8MUA0 341 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 NDC80O14777 642 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 B4GALT2O60909 372 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 CLDN14O95500 239 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 SERPIND1P05546 499 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 ENO3P13929 434 aaPredicted RBP15.54■□□□□ 0.08
VARS-216ENST00000428445 NPPBP16860 134 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 SMSP52788 366 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 SLC26A5P58743 744 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 BTG2P78543 158 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 EXT1Q16394 746 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 PHKG1Q16816 387 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 KRTCAP3Q53RY4 240 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 SLC25A25Q6KCM7 469 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 PAQR3Q6TCH7 311 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 C17orf64Q86WR6 236 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 ZNF227Q86WZ6 799 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 DOLPP1Q86YN1 238 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 CYP4X1Q8N118 509 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 MFSD9Q8NBP5 474 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 ZNF740Q8NDX6 193 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 AGAP11Q8TF27 550 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 LPAR4Q99677 370 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 TRIM51Q9BSJ1 452 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 SPNS1Q9H2V7 528 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 PCDHGB6Q9Y5F9 930 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 HIVEP1P15822 2718 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 CCDC168Q8NDH2 2452 aa15.54■□□□□ 0.08
VARS-216ENST00000428445 EIF3FO00303 357 aaPredicted RBP15.53■□□□□ 0.08
VARS-216ENST00000428445 CHST10O43529 356 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 OR1F1O43749 312 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 BANF1O75531 89 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 ABOP16442 354 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 GABRB3P28472 473 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 TPP2P29144 1249 aaPredicted RBP15.53■□□□□ 0.08
VARS-216ENST00000428445 RFC3P40938 356 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 NR0B1P51843 470 aaKnown RBP15.53■□□□□ 0.08
VARS-216ENST00000428445 CDKN2DP55273 166 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 DEFB134Q4QY38 66 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 CATSPEREQ5SY80 951 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 RBM20Q5T481 1227 aaKnown RBP15.53■□□□□ 0.08
VARS-216ENST00000428445 RPS19BP1Q86WX3 136 aaKnown RBP15.53■□□□□ 0.08
VARS-216ENST00000428445 MCUQ8NE86 351 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 CALML6Q8TD86 181 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 THAP11Q96EK4 314 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 SIGLEC10Q96LC7 697 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 OR4K3Q96R72 315 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 FAM129AQ9BZQ8 928 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 SLC17A6Q9P2U8 582 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 TRMT6Q9UJA5 497 aaKnown RBP15.53■□□□□ 0.08
VARS-216ENST00000428445 MED13LQ71F56 2210 aa15.53■□□□□ 0.08
VARS-216ENST00000428445 MAGEB17A8MXT2 336 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 ADAM10O14672 748 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 NDUFS4O43181 175 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 FHP07954 510 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 CCDC175P0C221 793 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 PTGER1P34995 402 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 HNF4AP41235 474 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 PCGF5Q86SE9 256 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 SLC5A8Q8N695 610 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 TMEM178AQ8NBL3 297 aa15.52■□□□□ 0.08
VARS-216ENST00000428445 ELP5Q8TE02 316 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms