RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 IFT81Q8WYA0 676 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 EXT2Q93063 718 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 MIB2Q96AX9 1013 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 TSPYL1Q9H0U9 437 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 RIC8BQ9NVN3 520 aa19.56■□□□□ 0.72
HSPG2-205ENST00000427897 RDH16O75452 317 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 C1GALT1C1LP0DN25 315 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 CRABP2P29373 138 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 AHRP35869 848 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 HNF4AP41235 474 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 GDF5P43026 501 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 PLEKHN1Q494U1 663 aaPredicted RBP19.55■□□□□ 0.72
HSPG2-205ENST00000427897 SULT1C3Q6IMI6 304 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 IGFL3Q6UXB1 125 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 ISLR2Q6UXK2 745 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 LINC00696Q6ZRV3 163 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 KRT78Q8N1N4 520 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 SNX31Q8N9S9 440 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 DNAJB14Q8TBM8 379 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 CCT6BQ92526 530 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 RHBDF1Q96CC6 855 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 SARGQ9BW04 601 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 SLC29A3Q9BZD2 475 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 NMRAL1Q9HBL8 299 aa19.55■□□□□ 0.72
HSPG2-205ENST00000427897 IGHV1-45A0A0A0MS14 117 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 ZNF860A6NHJ4 632 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 JRKO75564 520 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 COX6A1P12074 109 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 CD1DP15813 335 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 ALOX12P18054 663 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 SCTRP47872 440 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 REEP5Q00765 189 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 ACTN3Q08043 901 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-205ENST00000427897 CDC16Q13042 620 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 C18orf21Q32NC0 220 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-205ENST00000427897 DEFB134Q4QY38 66 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 STAG3L4Q8TBR4 150 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 NT5CQ8TCD5 201 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 MOCOSQ96EN8 888 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 PEX11GQ96HA9 241 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 CNDP1Q96KN2 507 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 CYTH2Q99418 400 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 MESP1Q9BRJ9 268 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 ZBTB20Q9HC78 741 aaPredicted RBP19.54■□□□□ 0.72
HSPG2-205ENST00000427897 PTGFRNQ9P2B2 879 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 SCN3AQ9NY46 2000 aa19.54■□□□□ 0.72
HSPG2-205ENST00000427897 TLN1Q9Y490 2541 aaKnown RBP19.54■□□□□ 0.72
HSPG2-205ENST00000427897 ANKDD1BA6NHY2 528 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 SORBS2O94875 1100 aaKnown RBP19.53■□□□□ 0.72
HSPG2-205ENST00000427897 ZNF888P0CJ79 500 aaPredicted RBP19.53■□□□□ 0.72
HSPG2-205ENST00000427897 IL10P22301 178 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 HSPA7P48741 367 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 AGTR2P50052 363 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 CDKL4Q5MAI5 379 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 CPEB2Q7Z5Q1 589 aaKnown RBP19.53■□□□□ 0.72
HSPG2-205ENST00000427897 NOA1Q8NC60 698 aaKnown RBP19.53■□□□□ 0.72
HSPG2-205ENST00000427897 TTLQ8NG68 377 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 FAR2Q96K12 515 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 WDR77Q9BQA1 342 aaPredicted RBP19.53■□□□□ 0.72
HSPG2-205ENST00000427897 TUBB6Q9BUF5 446 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 VN1R1Q9GZP7 353 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 ZNF700Q9H0M5 742 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 ZDHHC18Q9NUE0 388 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 DNAJC11Q9NVH1 559 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 ACOT9Q9Y305 439 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 IKBKGQ9Y6K9 419 aa19.53■□□□□ 0.72
HSPG2-205ENST00000427897 DYTNA2CJ06 578 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 SUPT3HB4E1H0 165 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 PSMD12O00232 456 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 CCNT2O60583 730 aaKnown RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 SUPT3HO75486 399 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 STK16O75716 305 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 SERPINA7P05543 415 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 CYC1P08574 325 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 PRR35P0CG20 571 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 CD97P48960 835 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 RAB8AP61006 207 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 STXBP1P61764 594 aaKnown RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 Q0VFX4 171 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 EFTUD2Q15029 972 aaKnown RBP eCLIP19.52■□□□□ 0.728e-8■■■■■ 38.2
HSPG2-205ENST00000427897 OR4D1Q15615 310 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 ZKSCAN8Q15776 578 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 HIST2H2ACQ16777 129 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 CRB2Q5IJ48 1285 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 TOR1AIP1Q5JTV8 583 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 MROH9Q5TGP6 573 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 HIST2H2AA3Q6FI13 130 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 TMEM205Q6UW68 189 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 TMIGD1Q6UXZ0 262 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 CMC1Q7Z7K0 106 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 PDSS2Q86YH6 399 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 CISD2Q8N5K1 135 aaKnown RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 GALNT11Q8NCW6 608 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 KIAA1191Q96A73 305 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 MAGEB10Q96LZ2 347 aaPredicted RBP19.52■□□□□ 0.72
HSPG2-205ENST00000427897 LMF1Q96S06 567 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 RBCK1Q9BYM8 510 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 SPNS1Q9H2V7 528 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 ALG9Q9H6U8 611 aa19.52■□□□□ 0.72
HSPG2-205ENST00000427897 GPRC5BQ9NZH0 403 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms