RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 VLDLRP98155 873 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 DPY19L1Q2PZI1 675 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 HKDC1Q2TB90 917 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 AGTRAPQ6RW13 159 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 CRTC3Q6UUV7 619 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 CCDC81Q6ZN84 652 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ZNF554Q86TJ5 538 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 SERPINA11Q86U17 422 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ZZZ3Q8IYH5 903 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 C1orf52Q8N6N3 182 aaKnown RBP10.28□□□□□ -0.76
CUX1-205ENST00000425244 LMNTD1Q8N9Z9 388 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 PIK3C3Q8NEB9 887 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 GIPC3Q8TF64 312 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 CEP44Q9C0F1 390 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 PSME2Q9UL46 239 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ERVK-11Q9UQG0 969 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 BTBD3Q9Y2F9 522 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 SLC27A6Q9Y2P4 619 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 C2CD4DB7Z1M9 353 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 KPNA5O15131 536 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 SLC16A5O15375 505 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 YY2O15391 372 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 MYO1DO94832 1006 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 KCNK5O95279 499 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ETHE1O95571 254 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 FABP3P05413 133 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 CYP2A6P11509 494 aaPredicted RBP10.28□□□□□ -0.76
CUX1-205ENST00000425244 PRPH2P23942 346 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 TIE1P35590 1138 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 IL12RB1P42701 662 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 SRSF11Q05519 484 aaKnown RBP10.28□□□□□ -0.76
CUX1-205ENST00000425244 CDK5R2Q13319 367 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 TUBA3CQ13748 450 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ZNF284Q2VY69 593 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 EGFLAMQ63HQ2 1017 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ATG16L2Q8NAA4 619 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 BORCS5Q969J3 196 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 MAL2Q969L2 176 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 RAD21L1Q9H4I0 556 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 ITM2BQ9Y287 266 aa10.28□□□□□ -0.76
CUX1-205ENST00000425244 GNG14A0A1W2PPG7 69 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 SGTAO43765 313 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 SLC16A8O95907 504 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 ANXA4P09525 319 aaPredicted RBP10.27□□□□□ -0.76
CUX1-205ENST00000425244 CD72P21854 359 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 HTR1BP28222 390 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 KDELR2P33947 212 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 MAP2K4P45985 399 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 DAPP51397 102 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 BMXP51813 675 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 WNT3P56703 355 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 GABARAPL2P60520 117 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 LSM3P62310 102 aaKnown RBP10.27□□□□□ -0.76
CUX1-205ENST00000425244 GSTM4Q03013 218 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 TOP3AQ13472 1001 aaPredicted RBP10.27□□□□□ -0.76
CUX1-205ENST00000425244 SPCS2Q15005 226 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 RFX4Q33E94 735 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 GTF2IRD2BQ6EKJ0 949 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 BRAT1Q6PJG6 821 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 GTF2IRD2Q86UP8 949 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 MMAAQ8IVH4 418 aaKnown RBP10.27□□□□□ -0.76
CUX1-205ENST00000425244 WFIKKN2Q8TEU8 576 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 SUSD6Q92537 303 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 DUSP26Q9BV47 211 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 ASPSCR1Q9BZE9 553 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 IL1RAPQ9NPH3 570 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 SH3BP4Q9P0V3 963 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 STOX2Q9P2F5 926 aaPredicted RBP10.27□□□□□ -0.76
CUX1-205ENST00000425244 ERVK-18Q9QC07 812 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 RPS6KA6Q9UK32 745 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 GMPPBQ9Y5P6 360 aa10.27□□□□□ -0.76
CUX1-205ENST00000425244 TICRRQ7Z2Z1 1910 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 ZNF106Q9H2Y7 1883 aaKnown RBP10.27□□□□□ -0.77
CUX1-205ENST00000425244 GBAP04062 536 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 GSTM1P09488 218 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 EPHA2P29317 976 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 ALDH4A1P30038 563 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 MTAPQ13126 283 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 AQP6Q13520 282 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 DGCR6Q14129 220 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 ACOX1Q15067 660 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 ZNF829Q3KNS6 432 aaPredicted RBP10.27□□□□□ -0.77
CUX1-205ENST00000425244 SMUG1Q53HV7 270 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 IER5LQ5T953 404 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 CPTPQ5TA50 214 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 LIPJQ5W064 366 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 DUS1LQ6P1R4 473 aaKnown RBP10.27□□□□□ -0.77
CUX1-205ENST00000425244 PTOV1Q86YD1 416 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 RASGEF1AQ8N9B8 481 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 CNDP2Q96KP4 475 aaKnown RBP10.27□□□□□ -0.77
CUX1-205ENST00000425244 OR4K3Q96R72 315 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 RHNO1Q9BSD3 238 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 WRAP53Q9BUR4 548 aaKnown RBP10.27□□□□□ -0.77
CUX1-205ENST00000425244 TPT1P8Q9HAU6 139 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 TM9SF3Q9HD45 589 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 RASSF1Q9NS23 344 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 RUVBL1Q9Y265 456 aaKnown RBP10.27□□□□□ -0.77
CUX1-205ENST00000425244 PLXNB3Q9ULL4 1909 aa10.27□□□□□ -0.77
CUX1-205ENST00000425244 MGAT4DA6NG13 374 aa10.26□□□□□ -0.77
CUX1-205ENST00000425244 SLC16A6O15403 523 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms