RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ERVK-18Q9QC07 812 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 GPSM3Q9Y4H4 160 aa11.46□□□□□ -0.58
PTPRN-204ENST00000423636 ARHGEF17Q96PE2 2063 aaPredicted RBP11.46□□□□□ -0.58
PTPRN-204ENST00000423636 CABIN1Q9Y6J0 2220 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 A0A087WXM4 84 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 A0A096LPI6 279 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 LOC100130705A0A1B0GUX0 176 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 PDZK1P1A8MUH7 402 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 MYO1DO94832 1006 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 CDK4P11802 303 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 FCGR1AP12314 374 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 IGFBP5P24593 272 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 RRM2P31350 389 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 KDELR2P33947 212 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 PRIM2P49643 509 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 HNMTP50135 292 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 SNRPNP63162 240 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ADARB1P78563 741 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 DLX2Q07687 328 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 MADCAM1Q13477 382 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 HNRNPA1L2Q32P51 320 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 MED27Q6P2C8 311 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TMEM126BQ8IUX1 230 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 C8orf59Q8N0T1 100 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 MFSD2AQ8NA29 543 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 OR9Q2Q8NGE9 314 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 VANGL1Q8TAA9 524 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 UBTD2Q8WUN7 234 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ASB16Q96NS5 453 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 MKRN2Q9H000 416 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 RERGLQ9H628 205 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 PRSS16Q9NQE7 514 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 DNAJB9Q9UBS3 223 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 DYRK1BQ9Y463 629 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TRBV5-3A0A0A0MS03 114 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 M0QX08 132 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 FADS2O95864 444 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 C9P02748 559 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ASLP04424 464 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 IGFBP1P08833 259 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 CHRM5P08912 532 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 GJA4P35212 333 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 FEN1P39748 380 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 PSMD7P51665 324 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 KRT33BQ14525 404 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 SLC5A12Q1EHB4 618 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 VMACQ2NL98 169 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 WSCD2Q2TBF2 565 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 CAPN13Q6MZZ7 669 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 UTS2BQ765I0 119 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ZZZ3Q8IYH5 903 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ZNF555Q8NEP9 628 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 UTP15Q8TED0 518 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TSPEARQ8WU66 669 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 WFDC6Q9BQY6 131 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 SLC35A5Q9BS91 424 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 SLC29A3Q9BZD2 475 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TMCO1Q9UM00 188 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ANKDD1BA6NHY2 528 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 PRAMEF10O60809 474 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 PRPS1L1P21108 318 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 IDSP22304 550 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 GZMMP51124 257 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 CDH12P55289 794 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 LSM11P83369 360 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 CAMK2GQ13555 558 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 LAIR2Q6ISS4 152 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 VITQ6UXI7 678 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 GPR149Q86SP6 731 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 FAM129CQ86XR2 697 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 DCP2Q8IU60 420 aaKnown RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TMEFF1Q8IYR6 380 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 FERD3LQ96RJ6 166 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 ZDHHC5Q9C0B5 715 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 MIEF1Q9NQG6 463 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 SAGE1Q9NXZ1 904 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TAS2R16Q9NYV7 291 aa11.45□□□□□ -0.58
PTPRN-204ENST00000423636 TMEFF2Q9UIK5 374 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-204ENST00000423636 OR1F1O43749 312 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 LCMT2O60294 686 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 ERN1O75460 977 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 ERAL1O75616 437 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 KAT7O95251 611 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 PRNPP04156 253 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 HTR1AP08908 422 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 PRPS2P11908 318 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 AP1S2P56377 157 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 CREMQ03060 361 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 ERN2Q76MJ5 926 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 RBM45Q8IUH3 476 aaKnown RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 TERB1Q8NA31 727 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 GLB1L3Q8NCI6 653 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-204ENST00000423636 OR5D16Q8NGK9 328 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 C12orf66Q96MD2 445 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 CAPN10Q9HC96 672 aa11.44□□□□□ -0.58
PTPRN-204ENST00000423636 H3BMQ9 156 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms