RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OR2W5A6NFC9 320 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 SLC16A5O15375 505 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 ESRRAP11474 423 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 CD46P15529 392 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 IL10P22301 178 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 GRNP28799 593 aaKnown RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 EEF1DP29692 281 aaKnown RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 OC90Q02509 493 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 DHX9Q08211 1270 aaKnown RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 HERC3Q15034 1050 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 PPP1R7Q15435 360 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 OR1C1Q15619 314 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 NSDHLQ15738 373 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 H3F3CQ6NXT2 135 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 GDF7Q7Z4P5 450 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 PCGF5Q86SE9 256 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 PDSS2Q86YH6 399 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 AGGF1Q8N302 714 aaeCLIP15.21■□□□□ 0.032e-9■■■■■ 33.6
COL18A1-205ENST00000423214 HORMAD2Q8N7B1 307 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 NAT8LQ8N9F0 302 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 MFSD9Q8NBP5 474 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 ACTRT1Q8TDG2 376 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 ANP32BQ92688 251 aaKnown RBP15.21■□□□□ 0.03
COL18A1-205ENST00000423214 TM4SF19Q96DZ7 209 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 SIGLEC10Q96LC7 697 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 SIGLEC12Q96PQ1 595 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 SGPP1Q9BX95 441 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 MMP25Q9NPA2 562 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 CHST11Q9NPF2 352 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 ANKRD10Q9NXR5 420 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 ARL15Q9NXU5 204 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 NEU2Q9Y3R4 380 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 SLC22A7Q9Y694 548 aa15.21■□□□□ 0.03
COL18A1-205ENST00000423214 TEP1Q99973 2627 aaKnown RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 GABRR3A8MPY1 467 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 MAGEB17A8MXT2 336 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 SERPIND1P05546 499 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 COX6B1P14854 86 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 JAK1P23458 1154 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 ELAVL4P26378 380 aaKnown RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 HTR1EP28566 365 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 PTGER4P35408 488 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 CCR8P51685 355 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 OR4D2P58180 307 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 RHAGQ02094 409 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 ALDH6A1Q02252 535 aaKnown RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 PDAP1Q13442 181 aaKnown RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 USP10Q14694 798 aaKnown RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 PHKG1Q16816 387 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 RBM20Q5T481 1227 aaKnown RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 NIPAL1Q6NVV3 410 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 PAQR3Q6TCH7 311 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 SHISA5Q8N114 240 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 MDS2Q8NDY4 140 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 TSLPQ969D9 159 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 HES7Q9BYE0 225 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 TRIM54Q9BYV2 358 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 TSPAN10Q9H1Z9 355 aaPredicted RBP15.2■□□□□ 0.02
COL18A1-205ENST00000423214 ASIC3Q9UHC3 531 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 TINAGQ9UJW2 476 aa15.2■□□□□ 0.02
COL18A1-205ENST00000423214 OR1F1O43749 312 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 LCMT2O60294 686 aaKnown RBP15.19■□□□□ 0.02
COL18A1-205ENST00000423214 TTC4O95801 387 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 FHP07954 510 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 FNTAP49354 379 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 ST13P50502 369 aaKnown RBP15.19■□□□□ 0.02
COL18A1-205ENST00000423214 SMSP52788 366 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 CDKN2DP55273 166 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 AP1S2P56377 157 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 IL2P60568 153 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 MEF2AQ02078 507 aaPredicted RBP15.19■□□□□ 0.02
COL18A1-205ENST00000423214 RGS1Q08116 209 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 SPANXN3Q5MJ09 141 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 RNASEH2BQ5TBB1 312 aaKnown RBP15.19■□□□□ 0.02
COL18A1-205ENST00000423214 DUPD1Q68J44 220 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 ZNF740Q8NDX6 193 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 OR5T3Q8NGG3 340 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 PYCR2Q96C36 320 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 GPR137Q96N19 417 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 DDX47Q9H0S4 455 aaKnown RBP15.19■□□□□ 0.02
COL18A1-205ENST00000423214 LANCL2Q9NS86 450 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 PYCARDQ9ULZ3 195 aa15.19■□□□□ 0.02
COL18A1-205ENST00000423214 TRBC2A0A5B9 178 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 NDC80O14777 642 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 SNRPB2P08579 225 aaKnown RBP15.18■□□□□ 0.02
COL18A1-205ENST00000423214 CD96P40200 585 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 SLC26A5P58743 744 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 GNG11P61952 73 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 PWP1Q13610 501 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 C3AR1Q16581 482 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 DEFB134Q4QY38 66 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 SPINK14Q6IE38 97 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 XKRXQ6PP77 449 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 KIAA0408Q6ZU52 694 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 ABHD13Q7L211 337 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 GALNTL5Q7Z4T8 443 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 LGI4Q8N135 537 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 GPATCH11Q8N954 259 aa15.18■□□□□ 0.02
COL18A1-205ENST00000423214 PLPP5Q8NEB5 264 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms