RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CASP6P55212 293 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 CDKN2DP55273 166 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 ADORA2A-AS1P86434 159 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 ACTN3Q08043 901 aaPredicted RBP13.94□□□□□ -0.18
RPS28-201ENST00000417088 USP10Q14694 798 aaKnown RBP13.94□□□□□ -0.18
RPS28-201ENST00000417088 OR1C1Q15619 314 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 RBM20Q5T481 1227 aaKnown RBP13.94□□□□□ -0.18
RPS28-201ENST00000417088 LRRC8AQ8IWT6 810 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 PALM2Q8IXS6 379 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 MYO1HQ8N1T3 1032 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 ABHD11Q8NFV4 315 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 OR5T3Q8NGG3 340 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 THAP3Q8WTV1 239 aaPredicted RBP13.94□□□□□ -0.18
RPS28-201ENST00000417088 TSLPQ969D9 159 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 PBKQ96KB5 322 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 OR1F2PQ96R84 312 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 LPAR4Q99677 370 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 SARGQ9BW04 601 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 CHST11Q9NPF2 352 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 TAS2R13Q9NYV9 303 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 TINAGQ9UJW2 476 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 ZNF835Q9Y2P0 537 aa13.94□□□□□ -0.18
RPS28-201ENST00000417088 GABRR3A8MPY1 467 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 FAM227AF5H4B4 570 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 TSPAN12O95859 305 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 PGAM1P18669 254 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 POU3F2P20265 443 aaPredicted RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 EEF1DP29692 281 aaKnown RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 SLC26A5P58743 744 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 MEF2AQ02078 507 aaPredicted RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 ALDH6A1Q02252 535 aaKnown RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 DHX9Q08211 1270 aaKnown RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 CRYMQ14894 314 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 HERC3Q15034 1050 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 KRTCAP3Q53RY4 240 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 RNASEH2BQ5TBB1 312 aaKnown RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 XKRXQ6PP77 449 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 SLC5A8Q8N695 610 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 ZNF740Q8NDX6 193 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 OR4K1Q8NGD4 311 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 ADAMTS18Q8TE60 1221 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 PYCR2Q96C36 320 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 LINGO1Q96FE5 620 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 GPR137Q96N19 417 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 FRMD6Q96NE9 622 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 HAUS8Q9BT25 410 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 TSPAN10Q9H1Z9 355 aaPredicted RBP13.93□□□□□ -0.18
RPS28-201ENST00000417088 PPP2R2CQ9Y2T4 447 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 PDZD2O15018 2839 aa13.93□□□□□ -0.18
RPS28-201ENST00000417088 NPIPA5E9PKD4 350 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 CHST10O43529 356 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 OR1F1O43749 312 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 GALR3O60755 368 aaPredicted RBP13.92□□□□□ -0.18
RPS28-201ENST00000417088 NEURL1O76050 574 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 B3GALT4O96024 378 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 AHSGP02765 367 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 FHP07954 510 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 SP1P08047 785 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 SNRPB2P08579 225 aaKnown RBP13.92□□□□□ -0.18
RPS28-201ENST00000417088 HIST1H2AGP0C0S8 130 aaPredicted RBP13.92□□□□□ -0.18
RPS28-201ENST00000417088 CD46P15529 392 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 HIST1H2ADP20671 130 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 PTGER4P35408 488 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 CCR8P51685 355 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 OR4D2P58180 307 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 CCZ1BP86790 482 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 CCZ1P86791 482 aaPredicted RBP13.92□□□□□ -0.18
RPS28-201ENST00000417088 OC90Q02509 493 aaPredicted RBP13.92□□□□□ -0.18
RPS28-201ENST00000417088 PWP1Q13610 501 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 DEFB134Q4QY38 66 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 DUPD1Q68J44 220 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 Q6ZPB1 254 aaPredicted RBP13.92□□□□□ -0.18
RPS28-201ENST00000417088 GALNTL5Q7Z4T8 443 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 SPPL2CQ8IUH8 684 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 LGI4Q8N135 537 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 TMEM178AQ8NBL3 297 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 OR56A3Q8NH54 315 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 ELP5Q8TE02 316 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 TBC1D20Q96BZ9 403 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 SNF8Q96H20 258 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 MAGED4Q96JG8 741 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 HIST1H2AHQ96KK5 128 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 PHF12Q96QT6 1004 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 OR4K3Q96R72 315 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 HIST1H2AJQ99878 128 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 H2AFJQ9BTM1 129 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 CDCP1Q9H5V8 836 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 ARL15Q9NXU5 204 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 NPIPA1Q9UND3 350 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 JRKLQ9Y4A0 524 aa13.92□□□□□ -0.18
RPS28-201ENST00000417088 CSMD2Q7Z408 3487 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 NCOA6Q14686 2063 aaPredicted RBP13.91□□□□□ -0.18
RPS28-201ENST00000417088 TRBC2A0A5B9 178 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 NDC80O14777 642 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 NDUFS4O43181 175 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 BANF1O75531 89 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 MLYCDO95822 493 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 ESRRAP11474 423 aaPredicted RBP13.91□□□□□ -0.18
RPS28-201ENST00000417088 COX6B1P14854 86 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms