RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ITGAMP11215 1152 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 SSTR1P30872 391 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 AGTR2P50052 363 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 HNMTP50135 292 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 EFNA3P52797 238 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 CDKL1Q00532 357 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 C2orf54Q08AI8 447 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 NIPAL1Q6NVV3 410 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 ADAMTSL2Q86TH1 951 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 ZNF740Q8NDX6 193 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 GRHL3Q8TE85 626 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 HAS2Q92819 552 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 MOCOSQ96EN8 888 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 PEX11GQ96HA9 241 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 IMMP1LQ96LU5 166 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 AIF1LQ9BQI0 150 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 PELI2Q9HAT8 420 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 PLA2G3Q9NZ20 509 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 ZFP69BQ9UJL9 534 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 SLC22A14Q9Y267 594 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 UTP11Q9Y3A2 253 aaKnown RBP23.59■■□□□ 1.37
HLA-C-204ENST00000415537 CPAMD8Q8IZJ3 1885 aa23.59■■□□□ 1.37
HLA-C-204ENST00000415537 URADA6NGE7 173 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 ZNF860A6NHJ4 632 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 ALOX12P18054 663 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 AHRP35869 848 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 POU4F1Q01851 419 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 LANCL3Q6ZV70 420 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 ABHD13Q7L211 337 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 TMPRSS11BQ86T26 416 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 CEP97Q8IW35 865 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 ST6GALNAC3Q8NDV1 305 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 ANKRD49Q8WVL7 239 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 OR1F2PQ96R84 312 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.58■■□□□ 1.37
HLA-C-204ENST00000415537 SMYD2Q9NRG4 433 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 TEKT2Q9UIF3 430 aa23.58■■□□□ 1.37
HLA-C-204ENST00000415537 IGHV3-20A0A0C4DH32 117 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 CDC123O75794 336 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-204ENST00000415537 PIAS1O75925 651 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 DDAH2O95865 285 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 SCTRP47872 440 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 RBBP5Q15291 538 aaKnown RBP23.57■■□□□ 1.36
HLA-C-204ENST00000415537 TSNQ15631 228 aaKnown RBP23.57■■□□□ 1.36
HLA-C-204ENST00000415537 BTBD16Q32M84 506 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 ABHD17BQ5VST6 288 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 RPUSD3Q6P087 351 aaKnown RBP23.57■■□□□ 1.36
HLA-C-204ENST00000415537 NXPE4Q6UWF7 544 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 FAM180AQ6UWF9 173 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 ANKRD37Q7Z713 158 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 SHISA5Q8N114 240 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 AFAP1L2Q8N4X5 818 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 TRPV3Q8NET8 790 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 NT5CQ8TCD5 201 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 FAR1Q8WVX9 515 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 TSPAN17Q96FV3 270 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 MAGEB10Q96LZ2 347 aaPredicted RBP23.57■■□□□ 1.36
HLA-C-204ENST00000415537 RBCK1Q9BYM8 510 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 SPNS1Q9H2V7 528 aa23.57■■□□□ 1.36
HLA-C-204ENST00000415537 USP9XQ93008 2570 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-204ENST00000415537 TRAV17A0A0B4J275 112 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 OR2W5A6NFC9 320 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 GALR3O60755 368 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-204ENST00000415537 REEP5Q00765 189 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 ACTN3Q08043 901 aaPredicted RBP23.56■■□□□ 1.36
HLA-C-204ENST00000415537 USP10Q14694 798 aaKnown RBP23.56■■□□□ 1.36
HLA-C-204ENST00000415537 NSDHLQ15738 373 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 DEFB134Q4QY38 66 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 PLAG1Q6DJT9 500 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 C3orf62Q6ZUJ4 267 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 OR5T3Q8NGG3 340 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 CPNE1Q99829 537 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 MCMBPQ9BTE3 642 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 DERL2Q9GZP9 239 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 RAB17Q9H0T7 212 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 STMN3Q9NZ72 180 aa23.56■■□□□ 1.36
HLA-C-204ENST00000415537 MTO1Q9Y2Z2 717 aaKnown RBP23.56■■□□□ 1.36
HLA-C-204ENST00000415537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
HLA-C-204ENST00000415537 A8MUI8 341 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 CXorf49A8MYA2 514 aaPredicted RBP23.55■■□□□ 1.36
HLA-C-204ENST00000415537 WDR47O94967 919 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 F10P00742 488 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 ZNF888P0CJ79 500 aaPredicted RBP23.55■■□□□ 1.36
HLA-C-204ENST00000415537 MYBL2P10244 700 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 TNFSF10P50591 281 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 ZNF33BQ06732 778 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 ABRAXAS2Q15018 415 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 BCORP1Q8N888 145 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 PLPP5Q8NEB5 264 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 SUN3Q8TAQ9 357 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 CAB39LQ9H9S4 337 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 SLC5A6Q9Y289 635 aa23.55■■□□□ 1.36
HLA-C-204ENST00000415537 TCRBV9S1A1TA0A576 114 aa23.54■■□□□ 1.36
HLA-C-204ENST00000415537 NCF1BA6NI72 391 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-204ENST00000415537 NCF1CA8MVU1 366 aaPredicted RBP23.54■■□□□ 1.36
HLA-C-204ENST00000415537 H2AFYO75367 372 aaKnown RBP23.54■■□□□ 1.36
HLA-C-204ENST00000415537 WDPCPO95876 746 aa23.54■■□□□ 1.36
HLA-C-204ENST00000415537 FHP07954 510 aa23.54■■□□□ 1.36
HLA-C-204ENST00000415537 GSTA2P09210 222 aa23.54■■□□□ 1.36
HLA-C-204ENST00000415537 NCF1P14598 390 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms