RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CDH17Q12864 832 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 PTK6Q13882 451 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 GBX1Q14549 363 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 MAPKAPK3Q16644 382 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 NDUFA9Q16795 377 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 SFT2D3Q587I9 215 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 AARS2Q5JTZ9 985 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 CES4AQ5XG92 561 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 ICE2Q659A1 982 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 PTRHD1Q6GMV3 140 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 C8orf74Q6P047 294 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 PAPD4Q6PIY7 484 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 CCDC137Q6PK04 289 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 OTOAQ7RTW8 1153 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 LINC00523Q86TU6 105 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 ZNF227Q86WZ6 799 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 PLD3Q8IV08 490 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 RPRMLQ8N4K4 120 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 EIF1ADQ8N9N8 165 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 OR6P1Q8NGX9 317 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 MAGEC3Q8TD91 643 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 SMPDL3AQ92484 453 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 FOPNLQ96NB1 174 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 REPIN1Q9BWE0 567 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 CATSPERZQ9NTU4 200 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 HCN3Q9P1Z3 774 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 TAC3Q9UHF0 121 aa8.98□□□□□ -0.97
RFFL-203ENST00000413582 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 RPH3AQ9Y2J0 694 aaPredicted RBP8.98□□□□□ -0.97
RFFL-203ENST00000413582 MYO1CO00159 1063 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TFECO14948 347 aaPredicted RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 KPNA5O15131 536 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 PSMD3O43242 534 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 ZWINTO95229 277 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 CCNDBP1O95273 360 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 GAS8O95995 478 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 IL1RNP18510 177 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 RPS3P23396 243 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFFL-203ENST00000413582 TPP2P29144 1249 aaPredicted RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 ATP5DP30049 168 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 PPARGP37231 505 aaPredicted RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 GRIA1P42261 906 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TTPAP49638 278 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TAS2R50P59544 299 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 DR1Q01658 176 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 PRDX1Q06830 199 aaKnown RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 C2orf54Q08AI8 447 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 MYBPHQ13203 477 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 SNX1Q13596 522 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TSTA3Q13630 321 aaPredicted RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 USP10Q14694 798 aaKnown RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 ARHGAP19Q14CB8 494 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 CEBPEQ15744 281 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 CMPK2Q5EBM0 449 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 CTSL3PQ5NE16 218 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 VN1R4Q7Z5H5 301 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 PCGF5Q86SE9 256 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 CCDC71Q8IV32 467 aaPredicted RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 POGLUT1Q8NBL1 392 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 NOA1Q8NC60 698 aaKnown RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 OR9A1PQ8NGU1 263 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 OR51Q1Q8NH59 317 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFFL-203ENST00000413582 RND1Q92730 232 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 PEX13Q92968 403 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TSLPQ969D9 159 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 SEC16BQ96JE7 1060 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 KRT12Q99456 494 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 LPAR4Q99677 370 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 FAM129AQ9BZQ8 928 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 DDX47Q9H0S4 455 aaKnown RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 RAB17Q9H0T7 212 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TRIM45Q9H8W5 580 aaPredicted RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 KCNJ16Q9NPI9 418 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 UTP6Q9NYH9 597 aaKnown RBP8.97□□□□□ -0.97
RFFL-203ENST00000413582 ZNF148Q9UQR1 794 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TCAF1Q9Y4C2 921 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 TLN2Q9Y4G6 2542 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 VPS13CQ709C8 3753 aa8.97□□□□□ -0.97
RFFL-203ENST00000413582 ERI2A8K979 691 aaKnown RBP8.96□□□□□ -0.98
RFFL-203ENST00000413582 SGK494L7N484 410 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 CDK2AP1O14519 115 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 KLK8O60259 260 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 FOSL1P15407 271 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 TFEBP19484 476 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ADRA1DP25100 572 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 RFC3P40938 356 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 BCL6P41182 706 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 MEOX1P50221 254 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 PNLIPRP1P54315 467 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 SLC26A5P58743 744 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 RHAGQ02094 409 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ABRAXAS2Q15018 415 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ANKRD20A4Q4UJ75 823 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 TEX35Q5T0J7 233 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 TMEM211Q6ICI0 200 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 WDR93Q6P2C0 686 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 TTC27Q6P3X3 843 aa8.96□□□□□ -0.98
RFFL-203ENST00000413582 ADCK2Q7Z695 626 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms