RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 AKAP13Q12802 2813 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 IGHV5-10-1A0A0J9YXX1 117 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 MAGEB17A8MXT2 336 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SLC28A1O00337 649 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 NDUFAB1O14561 156 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CASC3O15234 703 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 PRAMEF10O60809 474 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CTSVO60911 334 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 VPS4BO75351 444 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SNRNP200O75643 2136 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 FAM107AO95990 144 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 MT-CO3P00414 261 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 STATHP02808 62 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 EIF2S1P05198 315 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 JUNP05412 331 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 ANKRD34CP0C6C1 535 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 LINC00032P0C843 101 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 HSD3B1P14060 373 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 HSD3B2P26439 372 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 AHRP35869 848 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 PIK3CBP42338 1070 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 NEK2P51955 445 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 RAP1GDS1P52306 607 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 UCNP55089 124 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 INHBCP55103 352 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 RPS13P62277 151 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 CXADRP78310 365 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 HSD11B2P80365 405 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 TRA2AQ13595 282 aaKnown RBP eCLIP8.55□□□□□ -1.04
HCG18-234ENST00000413358 ABRAXAS2Q15018 415 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ZIC1Q15915 447 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SPDYAQ5MJ70 313 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 NXNQ6DKJ4 435 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ADNP2Q6IQ32 1131 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CGB2Q6NT52 195 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CYB5D1Q6P9G0 228 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 RNF165Q6ZSG1 346 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 TMPRSS9Q7Z410 1059 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ASPGQ86U10 573 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CSNK1A1LQ8N752 337 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 GBP7Q8N8V2 638 aaPredicted RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 ANKRD53Q8N9V6 530 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CAMKVQ8NCB2 501 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 RCBTB1Q8NDN9 531 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 RFWD2Q8NHY2 731 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 TUBGCP3Q96CW5 907 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 CRELD1Q96HD1 420 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SLC41A2Q96JW4 573 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 RILPQ96NA2 401 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SERPINI1Q99574 410 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ELAC2Q9BQ52 826 aaKnown RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 TMEM120AQ9BXJ8 343 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ACPTQ9BZG2 426 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 PRORYQ9H606 182 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 MEAF6Q9HAF1 191 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 NMRK1Q9NWW6 199 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 AKAP7Q9P0M2 348 aaPredicted RBP8.55□□□□□ -1.04
HCG18-234ENST00000413358 KLHL14Q9P2G3 628 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 ZFP69BQ9UJL9 534 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 PLCL2Q9UPR0 1127 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 AP1M2Q9Y6Q5 423 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 SPEGQ15772 3267 aa8.55□□□□□ -1.04
HCG18-234ENST00000413358 FASNP49327 2511 aaKnown RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 ZFYVE26Q68DK2 2539 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 GOLGA8QA0A0J9YX86 632 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 ATP6AP2A0A1C7CYW4 349 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 GOLGA8OA6NCC3 632 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 URADA6NGE7 173 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 TMEM150CB9EJG8 249 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 GOLGA8NF8WBI6 632 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 H0YGG7 62 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 AGRPO00253 132 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 FOXE1O00358 373 aaPredicted RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 TLX3O43711 291 aaPredicted RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 LCMT2O60294 686 aaKnown RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 BRINP1O60477 761 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 SH3BGRLO75368 114 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 CLEC3AO75596 197 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 ATP6AP2O75787 350 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 RSL1D1O76021 490 aaKnown RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 TGFB1P01137 390 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 PRB1P04280 392 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 NELFEP18615 380 aaKnown RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 EPHA3P29320 983 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 CSTF2P33240 577 aaKnown RBP eCLIP8.54□□□□□ -1.047e-7■■■□□ 14.7
HCG18-234ENST00000413358 ARFIP2P53365 341 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 CLDN6P56747 220 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 PCBP4P57723 403 aaKnown RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 VSX2P58304 361 aaPredicted RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 ARF3P61204 181 aaPredicted RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 STXBP1P61764 594 aaKnown RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 INSM1Q01101 510 aaPredicted RBP8.54□□□□□ -1.04
HCG18-234ENST00000413358 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 ACY1Q03154 408 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 RELAQ04206 551 aa8.54□□□□□ -1.04
HCG18-234ENST00000413358 TUBB3Q13509 450 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms