RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF764Q96H86 408 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-205ENST00000410093 TBCDQ9BTW9 1192 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 WDR26Q9H7D7 661 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 WASH6PQ9NQA3 447 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 DDX18Q9NVP1 670 aaKnown RBP13.05□□□□□ -0.32
LIMS1-205ENST00000410093 C3orf18Q9UK00 162 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 BAG5Q9UL15 447 aa13.05□□□□□ -0.32
LIMS1-205ENST00000410093 IGLON5A6NGN9 336 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 MID1O15344 667 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 KCNK5O95279 499 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 HOXC4P09017 264 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-205ENST00000410093 MYCLP1P12525 358 aaPredicted RBP13.04□□□□□ -0.32
LIMS1-205ENST00000410093 LAMP2P13473 410 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 GDI1P31150 447 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 ARFIP1P53367 373 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 RAD23AP54725 363 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 SGCGQ13326 291 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 WSCD2Q2TBF2 565 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 CNPY1Q3B7I2 92 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 CCNYL2Q5T2Q4 361 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 EIF3MQ7L2H7 374 aaKnown RBP13.04□□□□□ -0.32
LIMS1-205ENST00000410093 PIWIL3Q7Z3Z3 882 aaKnown RBP13.04□□□□□ -0.32
LIMS1-205ENST00000410093 ANKRD46Q86W74 232 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 FAM129CQ86XR2 697 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 GALNT15Q8N3T1 639 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 HDDC3Q8N4P3 179 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 ZNF555Q8NEP9 628 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 ABHD11Q8NFV4 315 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 TTLQ8NG68 377 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 CYGBQ8WWM9 190 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 GABARAPL1Q9H0R8 117 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 CAAP1Q9H8G2 361 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 TPT1P8Q9HAU6 139 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 PRM3Q9NNZ6 103 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 IL1RAPQ9NPH3 570 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 C11orf16Q9NQ32 467 aa13.04□□□□□ -0.32
LIMS1-205ENST00000410093 C1orf226A1L170 272 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ZNF701M0R085 212 aaPredicted RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PGM3O95394 542 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PCCBP05166 539 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 LAMP1P11279 417 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 GSTT1P30711 240 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 KDELR2P33947 212 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PCGF2P35227 344 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 CDKN2CP42773 168 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ALDH3B2P48448 385 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 CCR8P51685 355 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 TAS2R38P59533 333 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 TOP3AQ13472 1001 aaPredicted RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 GK3PQ14409 553 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 GTDC1Q4AE62 458 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ZCCHC8Q6NZY4 707 aaKnown RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ENPP6Q6UWR7 440 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 CBLL1Q75N03 491 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 COMMD6Q7Z4G1 85 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 STK32CQ86UX6 486 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 SATL1Q86VE3 508 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ZZZ3Q8IYH5 903 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 SYNPOQ8N3V7 929 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 FAM110BQ8TC76 370 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 NUDT8Q8WV74 236 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 GABRG3Q99928 467 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 C1QTNF2Q9BXJ5 285 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PREBQ9HCU5 417 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ZDHHC4Q9NPG8 344 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PAPOLBQ9NRJ5 636 aaKnown RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 SLC6A13Q9NSD5 602 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PTTG2Q9NZH5 202 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ADAM29Q9UKF5 820 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 HCN2Q9UL51 889 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ICKQ9UPZ9 632 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 TMEM221A6NGB7 291 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ANKDD1BA6NHY2 528 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 M0R296 226 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 ETHE1O95571 254 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 KRT75O95678 551 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 IFNA14P01570 189 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 GSNP06396 782 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 FURINP09958 794 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 CDH2P19022 906 aaPredicted RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 NTSR1P30989 418 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 TRA2BP62995 288 aaKnown RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 PPP2R2BQ00005 443 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 VAC14Q08AM6 782 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 NADK2Q4G0N4 442 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 SLC44A4Q53GD3 710 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 RBM48Q5RL73 367 aaKnown RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 CATSPEREQ5SY80 951 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 TRIM40Q6P9F5 258 aa13.03□□□□□ -0.32
LIMS1-205ENST00000410093 SHQ1Q6PI26 577 aaKnown RBP13.03□□□□□ -0.32
LIMS1-205ENST00000410093 FAM83HQ6ZRV2 1179 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms