RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ACSL5Q9ULC5 683 aa19.31■□□□□ 0.68
USP39-204ENST00000409766 VILLO15195 856 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 THRBP10828 461 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 PPIBP23284 216 aaKnown RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 KDELR2P33947 212 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 PPP2R2BQ00005 443 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 LRRC23Q53EV4 343 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 FAM71E1Q6IPT2 247 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 ABRAXAS1Q6UWZ7 409 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 RBM44Q6ZP01 1051 aaKnown RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 CHST15Q7LFX5 561 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 C17orf64Q86WR6 236 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 SYNPOQ8N3V7 929 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 GOT1L1Q8NHS2 421 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 RDH12Q96NR8 316 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 SPATA9Q9BWV2 254 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 FZD4Q9ULV1 537 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 WDR37Q9Y2I8 494 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 SEC24DO94855 1032 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 KLK1P06870 262 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 ABCB1P08183 1280 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 MC1RQ01726 317 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 DLX2Q07687 328 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 VEZF1Q14119 521 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 RBBP5Q15291 538 aaKnown RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 ZIK1Q3SY52 487 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.3■□□□□ 0.68
USP39-204ENST00000409766 TMEM259Q4ZIN3 620 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 DUS1LQ6P1R4 473 aaKnown RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 R3HCC1LQ7Z5L2 792 aaKnown RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 HS3ST5Q8IZT8 346 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 TRIML2Q8N7C3 387 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 OR4K1Q8NGD4 311 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 GDF15Q99988 308 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 RHBGQ9H310 441 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 PELI2Q9HAT8 420 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 SMURF2Q9HAU4 748 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 WASH6PQ9NQA3 447 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 ATAD3AQ9NVI7 634 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 USE1Q9NZ43 259 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 SPATA7Q9P0W8 599 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 ZNF282Q9UDV7 671 aaPredicted RBP19.3■□□□□ 0.68
USP39-204ENST00000409766 VPS4AQ9UN37 437 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 CORO2BQ9UQ03 480 aa19.3■□□□□ 0.68
USP39-204ENST00000409766 TRIM64CA6NLI5 447 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 PLRG1O43660 514 aaKnown RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 ZNF682O95780 498 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 TBX6O95947 436 aaPredicted RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 ACP5P13686 325 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 DCTP40126 519 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 CDH15P55291 814 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 TAS2R50P59544 299 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 SGCGQ13326 291 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 SPIDRQ14159 915 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 RGNQ15493 299 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 TMEM196Q5HYL7 178 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 TMEM179BQ7Z7N9 219 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 ZDHHC21Q8IVQ6 265 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 ABHD11Q8NFV4 315 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 OR4A15Q8NGL6 344 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 ZFP28Q8NHY6 868 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 IL1RAPQ9NPH3 570 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 A0A1W2PPV9 198 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 PRR23AA6NEV1 266 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 AHCYL1O43865 530 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 NTSR1P30989 418 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 RPL3P39023 403 aaKnown RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 ALDH3B2P48448 385 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 HBA1P69905 142 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 C2orf80Q0P641 193 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 MPEG1Q2M385 716 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 BORAQ6PGQ7 559 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 SPESP1Q6UW49 350 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 SLC9B2Q86UD5 537 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 PJA1Q8NG27 643 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 OR5K1Q8NHB7 308 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 OR14C36Q8NHC7 312 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 GANCQ8TET4 914 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 SMPDL3AQ92484 453 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 GABRG3Q99928 467 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 RBM4BQ9BQ04 359 aaKnown RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 RBM4Q9BWF3 364 aaKnown RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 PCBD2Q9H0N5 130 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 CUEDC1Q9NWM3 386 aaPredicted RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 TUBA8Q9NY65 449 aaPredicted RBP19.29■□□□□ 0.68
USP39-204ENST00000409766 RPS6KA6Q9UK32 745 aa19.29■□□□□ 0.68
USP39-204ENST00000409766 A0A1W2PQU0 124 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 ENO4A6NNW6 628 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 SEMG1P04279 462 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 NUDT7P0C024 238 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 PPP1R8Q12972 351 aaKnown RBP19.28■□□□□ 0.68
USP39-204ENST00000409766 MLF2Q15773 248 aaPredicted RBP19.28■□□□□ 0.68
USP39-204ENST00000409766 KIAA1161Q6NSJ0 714 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 GALNT10Q86SR1 603 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 ANKRD53Q8N9V6 530 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 PPCDCQ96CD2 204 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 MTERF3Q96E29 417 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 MUS81Q96NY9 551 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 INSM2Q96T92 566 aaPredicted RBP19.28■□□□□ 0.68
USP39-204ENST00000409766 AIF1LQ9BQI0 150 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms