RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SHISA9B4DS77 424 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 MAGEB2O15479 319 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 FDPSP14324 419 aaKnown RBP3.3□□□□□ -1.88
PMS1-203ENST00000409593 MYOGP15173 224 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 ITIH1P19827 911 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 GPR183P32249 361 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 NDST2P52849 883 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 KIAA0141Q14154 515 aaPredicted RBP3.3□□□□□ -1.88
PMS1-203ENST00000409593 ANKRD33Q7Z3H0 272 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 RNF130Q86XS8 419 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 OR4N5Q8IXE1 308 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 SLC22A15Q8IZD6 547 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 SLC39A11Q8N1S5 342 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 TOMM40LQ969M1 308 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 GDAP1L1Q96MZ0 367 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 GTSE1Q9NYZ3 720 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 TP53TG3Q9ULZ0 132 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 CCL27Q9Y4X3 112 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 HCFC1P51610 2035 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 PRAF2O60831 178 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 RECQL5O94762 991 aaPredicted RBP3.3□□□□□ -1.88
PMS1-203ENST00000409593 HOXD4P09016 255 aaPredicted RBP3.3□□□□□ -1.88
PMS1-203ENST00000409593 CD59P13987 128 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 C4BPBP20851 252 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 PSMA3P25788 255 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 SSTR1P30872 391 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 LIMK2P53671 638 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 RAD23AP54725 363 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 MFAP3P55082 362 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 IL10RBQ08334 325 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 C1orf141Q5JVX7 400 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 SLC25A30Q5SVS4 291 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 CLEC4GQ6UXB4 293 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 CCDC186Q7Z3E2 898 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 SH2D6Q7Z4S9 175 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 HPS6Q86YV9 775 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 APCDD1Q8J025 514 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 OR8H2Q8N162 312 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 OR9Q2Q8NGE9 314 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 KIF18AQ8NI77 898 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 GRK7Q8WTQ7 553 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 IL12RB2Q99665 862 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 ATF6BQ99941 703 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 UBAC1Q9BSL1 405 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 C3orf14Q9HBI5 128 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 RAB9BQ9NP90 201 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 EXOC1Q9NV70 894 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 FAM120CQ9NX05 1096 aaKnown RBP3.3□□□□□ -1.88
PMS1-203ENST00000409593 SWAP70Q9UH65 585 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 SNX7Q9UNH6 387 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 STYXL1Q9Y6J8 313 aa3.3□□□□□ -1.88
PMS1-203ENST00000409593 RNF123Q5XPI4 1314 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 IGKV6D-41A0A0C4DH26 115 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 IGHV3-38A0A0C4DH36 116 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 IQCMA0A1B0GVH7 501 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 HMGB1P1B2RPK0 211 aaPredicted RBP3.29□□□□□ -1.88
PMS1-203ENST00000409593 SRRM5B3KS81 715 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 SPP1P10451 314 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 SELEP16581 610 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 IL4RP24394 825 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 GIFP27352 417 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 FKBP3Q00688 224 aaKnown RBP3.29□□□□□ -1.88
PMS1-203ENST00000409593 ZNF273Q14593 569 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 ZNF146Q15072 292 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 FAM174BQ3ZCQ3 159 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 SPECC1Q5M775 1068 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 FAM166AQ6J272 317 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 ERN2Q76MJ5 926 aaKnown RBP3.29□□□□□ -1.88
PMS1-203ENST00000409593 PRSS35Q8N3Z0 413 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 LINC00612Q8N6U2 182 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 SPPL2AQ8TCT8 520 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 CASP10Q92851 521 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 FER1L6-AS2Q96M78 137 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 KLK11Q9UBX7 282 aa3.29□□□□□ -1.88
PMS1-203ENST00000409593 RUVBL2Q9Y230 463 aaKnown RBP3.29□□□□□ -1.88
PMS1-203ENST00000409593 IGHV3-20A0A0C4DH32 117 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 TMEM150CB9EJG8 249 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 TRAFD1O14545 582 aaPredicted RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 KIF5CO60282 957 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 LRCH4O75427 683 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 MTRF1O75570 445 aaKnown RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 ADORA3P0DMS8 318 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 PCP11498 1178 aaKnown RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 EEF2P13639 858 aaKnown RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 FOLR2P14207 255 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 PKLRP30613 574 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 ATP4BP51164 291 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 ERVK-16P61578 105 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 BTG1P62324 171 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 TAZQ16635 292 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 UGCGQ16739 394 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 UPP1Q16831 310 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 ZNF542PQ5EBM4 170 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 DHRS11Q6UWP2 260 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 MACC1Q6ZN28 852 aa3.28□□□□□ -1.88
PMS1-203ENST00000409593 TIPARPQ7Z3E1 657 aaKnown RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 DNAJB7Q7Z6W7 309 aaPredicted RBP3.28□□□□□ -1.88
PMS1-203ENST00000409593 ABI3BPQ7Z7G0 1075 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms