RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CREB3L4Q8TEY5 395 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 MMABQ96EY8 250 aaPredicted RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 CTSFQ9UBX1 484 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 NXT1Q9UKK6 140 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 PTRH2Q9Y3E5 179 aaKnown RBP18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 ATMQ13315 3056 aa18.85■□□□□ 0.61
PDLIM2-207ENST00000409417 H0YIG0 161 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 NSA2O95478 260 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 TAC1P20366 129 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 FBLP22087 321 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 AVPR1BP47901 424 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 GTF2H2Q13888 395 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 NKG7Q16617 165 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 HIST2H2ACQ16777 129 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 HIST2H2AA3Q6FI13 130 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 GTF2H2CQ6P1K8 395 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 GOLGA7Q7Z5G4 137 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 AFAP1L2Q8N4X5 818 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 AMER3Q8N944 861 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 UBE2E3Q969T4 207 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 SLC6A16Q9GZN6 736 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 ZNF282Q9UDV7 671 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 ZNF490Q9ULM2 529 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 MAP4K5Q9Y4K4 846 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 PIEZO2Q9H5I5 2752 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 IGLV3-12A0A075B6K2 115 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 CDC14CA4D256 554 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 VSTM2BA6NLU5 285 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 A8MT66 165 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 GLRA3O75311 464 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 CLEC3AO75596 197 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 FURINP09958 794 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 IL1RNP18510 177 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 CRHR1P34998 444 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 FOLR3P41439 243 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 OCA2Q04671 838 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 SLC18A2Q05940 514 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 ABHD13Q7L211 337 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 OR9A4Q8NGU2 314 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 ZCCHC10Q8TBK6 192 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 ADAMTS17Q8TE56 1095 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 C1QTNF3Q9BXJ4 246 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 RHBGQ9H310 441 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 IPPKQ9H8X2 491 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 ANKHQ9HCJ1 492 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 TRPC4Q9UBN4 977 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 PCTPQ9UKL6 214 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 POLHQ9Y253 713 aa18.84■□□□□ 0.61
PDLIM2-207ENST00000409417 URADA6NGE7 173 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 ANKDD1BA6NHY2 528 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 DLX3O60479 287 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 UGDHO60701 494 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 ALOX12P18054 663 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 HYAL2Q12891 473 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 SSPNQ14714 243 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 LIPJQ5W064 366 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 PRSS41Q7RTY9 318 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 TRABD2AQ86V40 505 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 PDSS2Q86YH6 399 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 LAS2Q8IYD9 372 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 THAP4Q8WY91 577 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 TTC9Q92623 222 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 SPSB2Q99619 263 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 ACTR8Q9H981 624 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 EMCNQ9ULC0 261 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 GRID1Q9ULK0 1009 aa18.83■□□□□ 0.6
PDLIM2-207ENST00000409417 ERVH48-1M5A8F1 160 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 COPEO14579 308 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 ERLIN1O75477 346 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 KLHL18O94889 574 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 UMODP07911 640 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 RPS17P08708 135 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 ATP5F1P24539 256 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 HNF4AP41235 474 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 FOXL2P58012 376 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 STXBP1P61764 594 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 HERVK_113P63132 956 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 SKP1P63208 163 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 TBR1Q16650 682 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 DEFB109BQ30KR1 87 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 GRHL2Q6ISB3 625 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 NIPAL1Q6NVV3 410 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 MED27Q6P2C8 311 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 BORAQ6PGQ7 559 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 VN1R5Q7Z5H4 357 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 SLC22A9Q8IVM8 553 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 IQCKQ8N0W5 287 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 C4orf33Q8N1A6 199 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 STT3BQ8TCJ2 826 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 UTP15Q8TED0 518 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 EXTL1Q92935 676 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 ERVK-6Q9BXR3 956 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 TGIF2Q9GZN2 237 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 NOL11Q9H8H0 719 aaKnown RBP18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 MKKSQ9NPJ1 570 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 NAALAD2Q9Y3Q0 740 aa18.82■□□□□ 0.6
PDLIM2-207ENST00000409417 CCDC151A5D8V7 595 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 LRIT2A6NDA9 550 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 SGK494L7N484 410 aa18.81■□□□□ 0.6
PDLIM2-207ENST00000409417 GALR3O60755 368 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms