RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 VN1R1Q9GZP7 353 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 EHD1Q9H4M9 534 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 COPS7BQ9H9Q2 264 aaPredicted RBP12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 MMP25Q9NPA2 562 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 WHRNQ9P202 907 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 NAALAD2Q9Y3Q0 740 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 MMACHCQ9Y4U1 282 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 OARD1Q9Y530 152 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 SEC16AO15027 2179 aa12.15□□□□□ -0.47
SNORD88B-201ENST00000408454 ANKDD1BA6NHY2 528 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 CLGNO14967 610 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 PRMT3O60678 531 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 GUCA1CO95843 209 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 SERPINA6P08185 405 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 STMN1P16949 149 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 IL1RNP18510 177 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 EEF1DP29692 281 aaKnown RBP12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 STX2P32856 288 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 SPRP35270 261 aaPredicted RBP12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 OR4D2P58180 307 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 PHEXP78562 749 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 CBLBQ13191 982 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 PCOLCEQ15113 449 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 FAAH2Q6GMR7 532 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 TRIM40Q6P9F5 258 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 QSOX2Q6ZRP7 698 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 MICALCLQ6ZW33 695 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 VN1R4Q7Z5H5 301 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 TMPRSS11BQ86T26 416 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 ZBED8Q8IZ13 594 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 SIRT6Q8N6T7 355 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 POGLUT1Q8NBL1 392 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 FBXO36Q8NEA4 188 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 ZCCHC10Q8TBK6 192 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 IMMP1LQ96LU5 166 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 EFCAB11Q9BUY7 163 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 DERL2Q9GZP9 239 aa12.14□□□□□ -0.47
SNORD88B-201ENST00000408454 BOD1L1Q8NFC6 3051 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 A8MUI8 341 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 E7ESA3 106 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 GALR3O60755 368 aaPredicted RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 STSP08842 583 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 SAT1P21673 171 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 SCTRP47872 440 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 SMSP52788 366 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 CDKN2DP55273 166 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 OC90Q02509 493 aaPredicted RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 BIKQ13323 160 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 EFTUD2Q15029 972 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 RBBP5Q15291 538 aaKnown RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 PRR30Q53SZ7 412 aaPredicted RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 ACER2Q5QJU3 275 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 PAPD4Q6PIY7 484 aaKnown RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 GFRALQ6UXV0 394 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 THOC6Q86W42 341 aaKnown RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 ZC3HC1Q86WB0 502 aaKnown RBP12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 PLD3Q8IV08 490 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 GAL3ST3Q96A11 431 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 KIAA1191Q96A73 305 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 MOCOSQ96EN8 888 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 MAGED4Q96JG8 741 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 NT5DC2Q9H857 520 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 PRDM9Q9NQV7 894 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 WWOXQ9NZC7 414 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 HCN3Q9P1Z3 774 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 SEC14L3Q9UDX4 400 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 ADGRE2Q9UHX3 823 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 ADAMTS6Q9UKP5 1117 aa12.13□□□□□ -0.47
SNORD88B-201ENST00000408454 KRT87PA6NCN2 255 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 WIPF3A6NGB9 483 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 SYCE1LA8MT33 242 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 SGK494L7N484 410 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 P2RX6O15547 441 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 B3GALT2O43825 422 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 RDH16O75452 317 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 WDR47O94967 919 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 LDLRP01130 860 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 PHBP35232 272 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 GP5P40197 560 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 REEP5Q00765 189 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 USP10Q14694 798 aaKnown RBP12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 DEFB134Q4QY38 66 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 SFT2D3Q587I9 215 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 ZNF766Q5HY98 468 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 RBM20Q5T481 1227 aaKnown RBP12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 SULT1C3Q6IMI6 304 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 NXPE4Q6UWF7 544 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 TMIGD1Q6UXZ0 262 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 ANKRD37Q7Z713 158 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 TBC1D1Q86TI0 1168 aaPredicted RBP12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 CREG2Q8IUH2 290 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 NEIL2Q969S2 332 aa12.12□□□□□ -0.47
SNORD88B-201ENST00000408454 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms