RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SCN3AQ9NY46 2000 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 OR6C70A6NIJ9 312 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 APOL3O95236 402 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 ZNF517Q6ZMY9 492 aaPredicted RBP11.7□□□□□ -0.54
SMCR8-201ENST00000406438 TMPRSS9Q7Z410 1059 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 NFKBIDQ8NI38 313 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 PYCR2Q96C36 320 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 SLIT2O94813 1529 aa11.7□□□□□ -0.54
SMCR8-201ENST00000406438 A0A1B0GVI7 797 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 DISC1C4P0D8 188 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 MATN2O00339 956 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GSTT2P0CG29 244 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 IRF2P14316 349 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ZNF30P17039 623 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TUBA1BP68363 451 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 NPTX1Q15818 432 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 KCTD19Q17RG1 926 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TUBA1AQ71U36 451 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ASB9Q96DX5 294 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 STRA6Q9BX79 667 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TAS2R9Q9NYW1 312 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TCRBV7S2A1N4TA0A589 114 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 B4GALT2O60909 372 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ARL6IP5O75915 188 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 RALGPS1Q5JS13 557 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 FTMTQ8N4E7 242 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GALNT11Q8NCW6 608 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GSKIPQ9P0R6 139 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 NPIPA2E9PIF3 369 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 NPIPA3F8WFD2 350 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ECI2O75521 394 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GLP1RP43220 463 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 FOXK1P85037 733 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 LRRC66Q68CR7 880 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GTF2IRD2BQ6EKJ0 949 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 PAQR3Q6TCH7 311 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TMPPEQ6ZT21 453 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GTF2IRD2Q86UP8 949 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 THOC6Q86W42 341 aaKnown RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 FANK1Q8TC84 345 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 C17orf50Q8WW18 174 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 CAPNS2Q96L46 248 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 AKTIPQ9H8T0 292 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 PCDHB14Q9Y5E9 798 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TEX13DA0A0J9YY54 714 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 PRKCGP05129 697 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ENTPD1P49961 510 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 AFF1P51825 1210 aaKnown RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 DSC3Q14574 896 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 IQCKQ8N0W5 287 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 OR4E2Q8NGC2 313 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 OAZ3Q9UMX2 235 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 B8ZZF3 427 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ASPAP45381 313 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 RAB15P59190 212 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 PCBP2Q15366 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 FCAMRQ8WWV6 532 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 MAFIPQ8WZ33 124 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 GATA5Q9BWX5 397 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TLR9Q9NR96 1032 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 TAS2R10Q9NYW0 307 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 SCML2Q9UQR0 700 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 OR6N1Q8NGY5 312 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 KCNN1Q92952 543 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 ACTL8Q9H568 366 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 PADI2Q9Y2J8 665 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 A0A1W2PPL8 197 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 UPK3BL1B0FP48 263 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 UPK3BL2E5RIL1 263 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 YES1P07947 543 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 SLC15A1P46059 708 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 NRIP1P48552 1158 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 AIMP2Q13155 320 aaKnown RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 LACTB2Q53H82 288 aaPredicted RBP11.69□□□□□ -0.54
SMCR8-201ENST00000406438 SH3PXD2AQ5TCZ1 1133 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 OR5J2Q8NH18 312 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 LMX1AQ8TE12 382 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 FCRL5Q96RD9 977 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 EBF3Q9H4W6 596 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 HHATLQ9HCP6 504 aa11.69□□□□□ -0.54
SMCR8-201ENST00000406438 EI24O14681 340 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 FARS2O95363 451 aaKnown RBP11.68□□□□□ -0.54
SMCR8-201ENST00000406438 ERCC1P07992 297 aaPredicted RBP11.68□□□□□ -0.54
SMCR8-201ENST00000406438 HYAL2Q12891 473 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 CHRNA6Q15825 494 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 SLC10A6Q3KNW5 377 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 SMARCD2Q92925 531 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 BTBD1Q9H0C5 482 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 SLC2A4RGQ9NR83 387 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 OXSMQ9NWU1 459 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 TAC3Q9UHF0 121 aa11.68□□□□□ -0.54
SMCR8-201ENST00000406438 CDH10Q9Y6N8 788 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms