RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 SYT16Q17RD7 645 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 TIGD6Q17RP2 521 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 INAVAQ3KP66 663 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 IFI44LQ53G44 452 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 BRAT1Q6PJG6 821 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 SLC22A16Q86VW1 577 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 ARMC8Q8IUR7 673 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 NAGSQ8N159 534 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 OR10G2Q8NGC3 310 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 SPPL2AQ8TCT8 520 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 GGHQ92820 318 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 KCNC2Q96PR1 638 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 RAD9AQ99638 391 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 HMX1Q9NP08 348 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 RAD18Q9NS91 495 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 STOX2Q9P2F5 926 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 ATP6V1HQ9UI12 483 aa10.34□□□□□ -0.75
CLIP4-204ENST00000404424 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 NUP214P35658 2090 aaPredicted RBP10.34□□□□□ -0.75
CLIP4-204ENST00000404424 MTX2O75431 263 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 VIPP01282 170 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 TIA1P31483 386 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 MICAQ29983 383 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 CATSPEREQ5SY80 951 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SPOUT1Q5T280 376 aaKnown RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 C10orf62Q5T681 223 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 GDPD4Q6W3E5 623 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 GAREM2Q75VX8 874 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SLC46A3Q7Z3Q1 461 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 TSEN54Q7Z6J9 526 aaKnown RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF605Q86T29 641 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 HS6ST3Q8IZP7 471 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 TRAM1L1Q8N609 369 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OR7G3Q8NG95 312 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OR4A15Q8NGL6 344 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OR56A3Q8NH54 315 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 PSMA8Q8TAA3 256 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 MAL2Q969L2 176 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 TMEM159Q96B96 161 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 REPS1Q96D71 796 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 CRELD1Q96HD1 420 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 COL21A1Q96P44 957 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 NXF2Q9GZY0 626 aaKnown RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ZBTB20Q9HC78 741 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 THSD1Q9NS62 852 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SH3BP4Q9P0V3 963 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ANKMY1Q9P2S6 941 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ENOPH1Q9UHY7 261 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 PNMA8BQ9ULN7 279 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OBSL1O75147 1896 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 KRT87PA6NCN2 255 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 AGAP5A6NIR3 686 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 WASH3PC4AMC7 463 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 GCM2O75603 506 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ETHE1O95571 254 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 C21orf33P30042 268 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SERPINB1P30740 379 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 VIPR1P32241 457 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OLR1P78380 273 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 FCHO2Q0JRZ9 810 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 GAB1Q13480 694 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SYTL3Q4VX76 610 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 CMTM8Q8IZV2 173 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SLC39A11Q8N1S5 342 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 KBTBD8Q8NFY9 601 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OR52N2Q8NGI0 321 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 OR4C15Q8NGM1 316 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 HUS1BQ8NHY5 278 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF675Q8TD23 568 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 MED8Q96G25 268 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ABHD8Q96I13 439 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SCLYQ96I15 445 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF558Q96NG5 402 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 ZSCAN5AQ9BUG6 496 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 TMEM38AQ9H6F2 299 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 CCDC59Q9P031 241 aaKnown RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 NFKBIL1Q9UBC1 381 aaPredicted RBP10.33□□□□□ -0.76
CLIP4-204ENST00000404424 TESMINQ9Y4I5 508 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 PCDHGA2Q9Y5H1 932 aa10.33□□□□□ -0.76
CLIP4-204ENST00000404424 COL4A6Q14031 1691 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 TRAV19A0A0A6YYK7 116 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 GNG14A0A1W2PPG7 69 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 PLK4O00444 970 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF197O14709 1029 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 PCDH7O60245 1069 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 HLA-EP13747 358 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 POLR2EP19388 210 aaKnown RBP10.32□□□□□ -0.76
CLIP4-204ENST00000404424 AQP1P29972 269 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 TGFBR1P36897 503 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 RPL3P39023 403 aaKnown RBP10.32□□□□□ -0.76
CLIP4-204ENST00000404424 SLC19A1P41440 591 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 CRATP43155 626 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 MVDP53602 400 aa10.32□□□□□ -0.76
CLIP4-204ENST00000404424 ZNF45Q02386 682 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms