RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 OARD1Q9Y530 152 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 VSTM2BA6NLU5 285 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RNF225M0QZC1 329 aaPredicted RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 LCA5LO95447 670 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 STATHP02808 62 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 IMPDH1P20839 514 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 NRG1Q02297 640 aaPredicted RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 SRYQ05066 204 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 DMTNQ08495 405 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 BTBD16Q32M84 506 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 PAQR3Q6TCH7 311 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 RBM44Q6ZP01 1051 aaKnown RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 FTMTQ8N4E7 242 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 KLF16Q9BXK1 252 aaPredicted RBP7.69□□□□□ -1.18
USP47-203ENST00000399455 ENY2Q9NPA8 101 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 DHRS7Q9Y394 339 aa7.69□□□□□ -1.18
USP47-203ENST00000399455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 IGKV6-21A0A0C4DH24 114 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 IQCMA0A1B0GVH7 501 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 WRBO00258 174 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 BCL10O95999 233 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PXNP49023 591 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 ZNF630Q2M218 657 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 CLEC6AQ6EIG7 209 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 OR52E8Q6IFG1 317 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 TMEFF1Q8IYR6 380 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 UMODL1-AS1Q8N2C9 162 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 LRRC25Q8N386 305 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 C1orf52Q8N6N3 182 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 DIO2Q92813 273 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 RANBP9Q96S59 729 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 MGME1Q9BQP7 344 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 FUCA2Q9BTY2 467 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PELI2Q9HAT8 420 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 MCTS1Q9ULC4 181 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 C1orf226A1L170 272 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 GADD45GO95257 159 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PRDX6P30041 224 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SCTRP47872 440 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 CDKN3Q16667 212 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 METTL21CQ5VZV1 264 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 TMEM53Q6P2H8 277 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 IZUMO2Q6UXV1 221 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 CEP97Q8IW35 865 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 KBTBD7Q8WVZ9 684 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SORCS1Q8WY21 1168 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 YIPF4Q9BSR8 244 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 L2HGDHQ9H9P8 463 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 RAB9BQ9NP90 201 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 AGPAT4Q9NRZ5 378 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SIX4Q9UIU6 781 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 BOKQ9UMX3 212 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 KPNA4O00629 521 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 SRFP11831 508 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 NIPAL4Q0D2K0 466 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 SEC23BQ15437 767 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 UBAP2Q5T6F2 1119 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 NAIF1Q69YI7 327 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 C14orf80Q86SX3 495 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SVOPLQ8N434 492 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 RNF148Q8N7C7 305 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 CHST4Q8NCG5 386 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 DNAAF1Q8NEP3 725 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 BPIFB6Q8NFQ5 453 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 OR56A3Q8NH54 315 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 TWNKQ96RR1 684 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SERINC2Q96SA4 455 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 NPLQ9BXD5 320 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 TMEM121BQ9BXQ6 578 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 LRIT1Q9P2V4 623 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PRSS38A1L453 326 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 ANXA2P2A6NMY6 339 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 MANBAO00462 879 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 IDH3BO43837 385 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 ANXA2P07355 339 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 FAM153BP0C7A2 387 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 CNR2P34972 360 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 STC1P52823 247 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 ERVK-8P63133 956 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 SOX4Q06945 474 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 PMS2P3Q13401 168 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 MPP7Q5T2T1 576 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 MANEALQ5VSG8 457 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 GIPC3Q8TF64 312 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 JPH3Q8WXH2 748 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 ACOT12Q8WYK0 555 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 LPGAT1Q92604 370 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 RCN3Q96D15 328 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 ALG2Q9H553 416 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 XKR8Q9H6D3 395 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 PNPOQ9NVS9 261 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 GPC6Q9Y625 555 aaPredicted RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 PRAMEF2O60811 474 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 HRGP04196 525 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 JUNP05412 331 aaKnown RBP7.68□□□□□ -1.18
USP47-203ENST00000399455 TCF4P15884 667 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 BMP8BP34820 402 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 NFATC4Q14934 902 aa7.68□□□□□ -1.18
USP47-203ENST00000399455 KIR2DS3Q14952 304 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms