RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CXCR2P25025 360 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NEK2P51955 445 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PKNOX1P55347 436 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LAPTM5Q13571 262 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RCN2Q14257 317 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GRM7Q14831 915 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TGIF1Q15583 401 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CHI3L2Q15782 390 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ADPRMQ3LIE5 342 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ARL13AQ5H913 290 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PAGE2BQ5JRK9 111 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TMEM164Q5U3C3 297 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF517Q6ZMY9 492 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MILR1Q7Z6M3 343 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MYLK4Q86YV6 388 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TMEM151BQ8IW70 566 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 AFAP1L2Q8N4X5 818 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GOLGA6L1Q8N7Z2 621 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CDYL2Q8N8U2 506 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GALNT6Q8NCL4 622 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HUS1BQ8NHY5 278 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ATP6V1E2Q96A05 226 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RERGQ96A58 199 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LRFN5Q96NI6 719 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MS4A8Q9BY19 250 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 C20orf27Q9GZN8 174 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TSC22D4Q9Y3Q8 395 aa11.81□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MEN1O00255 615 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DSCR3O14972 297 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LYPLA1O75608 230 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ESRRBO95718 433 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SERPINE1P05121 402 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CAPN1P07384 714 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SERPINA6P08185 405 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PCNAP12004 261 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 BGNP21810 368 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GSTM2P28161 218 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NAA20P61599 178 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PPP2R2AP63151 447 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SRSF6Q13247 344 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PWP1Q13610 501 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TOR1AIP1Q5JTV8 583 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CFAP157Q5JU67 520 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HHATQ5VTY9 493 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 C1orf189Q5VU69 101 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GARNL3Q5VVW2 1013 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FAM198BQ6UWH4 519 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 UNQ6494/PRO21346Q6UXR6 183 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TTLL10Q6ZVT0 673 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CUZD1Q86UP6 607 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DSELQ8IZU8 1212 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 METTL27Q8N6F8 245 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TTC29Q8NA56 475 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CAMKVQ8NCB2 501 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TRPV3Q8NET8 790 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TTLQ8NG68 377 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SNIP1Q8TAD8 396 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZCCHC10Q8TBK6 192 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 UTP15Q8TED0 518 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SEC16BQ96JE7 1060 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CNDP1Q96KN2 507 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MTERF1Q99551 399 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PAIP2Q9BPZ3 127 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TRMOQ9BU70 441 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC29A3Q9BZD2 475 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DRC3Q9H069 523 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ACBD3Q9H3P7 528 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CCDC86Q9H6F5 360 aaKnown RBP11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DMRT3Q9NQL9 472 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 IRAK4Q9NWZ3 460 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TIMM22Q9Y584 194 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SCN3AQ9NY46 2000 aa11.8□□□□□ -0.52
HLA-DQB1-203ENST00000399082 A0A0A6YYC8 382 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 A0A1B0GX78 115 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LRIT2A6NDA9 550 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MAGEB17A8MXT2 336 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TMEM233B4DJY2 109 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 STMND1H3BQB6 276 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 I3L1I5 382 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TAF4O00268 1085 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MANBAO00462 879 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RAD1O60671 282 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CNOT3O75175 753 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DNAJB6O75190 326 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SERPIND1P05546 499 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC35G6P0C7Q6 338 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF888P0CJ79 500 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CHN1P15882 459 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 IL1RNP18510 177 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CD82P27701 267 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ARL1P40616 181 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms