RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 C11orf49Q9H6J7 331 aa8.11□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC28A3Q9HAS3 691 aa8.11□□□□□ -1.11
SPTLC3-201ENST00000399002 MYNNQ9NPC7 610 aa8.11□□□□□ -1.11
SPTLC3-201ENST00000399002 FAM53CQ9NYF3 392 aa8.11□□□□□ -1.11
SPTLC3-201ENST00000399002 PRODH2Q9UF12 536 aa8.11□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF536O15090 1300 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CXorf49A8MYA2 514 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 NPC1O15118 1278 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 TBX1O43435 398 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CA12O43570 354 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 NIPSNAP2O75323 286 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 AHSGP02765 367 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 KLK1P06870 262 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 POU2F1P14859 743 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 XRCC1P18887 633 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 YAP1P46937 504 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SEC13P55735 322 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 TPTEP56180 551 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ACTA2P62736 377 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ACTG2P63267 376 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 EML3Q32P44 896 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SETD7Q8WTS6 366 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CANT1Q8WVQ1 401 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 COQ8BQ96D53 544 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC2A4RGQ9NR83 387 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SCP2D1Q9UJQ7 156 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CLCA3PQ9Y6N3 262 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LAMB4A4D0S4 1761 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SIGLEC1Q9BZZ2 1709 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SOBPA7XYQ1 873 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 H3BUI4 141 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LSM1O15116 133 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PPM1BO75688 479 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 BTN3A2P78410 334 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 FPGSQ05932 587 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 POMZP3Q6PJE2 187 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC2A7Q6PXP3 512 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PRSS55Q6UWB4 352 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LYSMD3Q7Z3D4 306 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 RBM23Q86U06 439 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC22A15Q8IZD6 547 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MARVELD2Q8N4S9 558 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF717Q9BY31 904 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MINDY3Q9H8M7 445 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LRP6O75581 1613 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 RPL10P27635 214 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PLA2G16P53816 162 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CBFBQ13951 182 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 RCAN2Q14206 197 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MINDY4Q4G0A6 757 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 OGFOD2Q6N063 350 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 C6orf89Q6UWU4 347 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LRRC69Q6ZNQ3 347 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GALNTL5Q7Z4T8 443 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GHDCQ8N2G8 530 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MYOCQ99972 504 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PCDHAC1Q9H158 963 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 DNAJC5Q9H3Z4 198 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF696Q9H7X3 374 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 RMI1Q9H9A7 625 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PNO1Q9NRX1 252 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ERVK-11Q9UQG0 969 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 TOPAZ1Q8N9V7 1692 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LTBP3Q9NS15 1303 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 HTR3EA5X5Y0 456 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 E7ESA3 106 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 TBX10O75333 385 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GLP1RP43220 463 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 BDKRB1P46663 353 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SOX9P48436 509 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ZNF41P51814 821 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 AKR1D1P51857 326 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MLLT6P55198 1093 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CDH11P55287 796 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 UFM1P61960 85 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ARF5P84085 180 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GBX1Q14549 363 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 MAD2L1BPQ15013 274 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 KANK2Q63ZY3 851 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 KIAA1161Q6NSJ0 714 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 LHFPL3Q86UP9 236 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 STOML3Q8TAV4 291 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 FCAMRQ8WWV6 532 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SLC7A6OSQ96CW6 309 aaPredicted RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GFM1Q96RP9 751 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PIP5K1AQ99755 562 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 FBRSQ9HAH7 460 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GRXCR2A6NFK2 248 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PIRO00625 290 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 ITGB1P05556 798 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 PDHA2P29803 388 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 FGL1Q08830 312 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 GPR17Q13304 367 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 METTL2BQ6P1Q9 378 aaKnown RBP8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 CEACAM20Q6UY09 585 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 SIX5Q8N196 739 aa8.1□□□□□ -1.11
SPTLC3-201ENST00000399002 OR6K6Q8NGW6 343 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms