RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 EMX1Q04741 257 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MED22Q15528 200 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TAB1Q15750 504 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TSTQ16762 297 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 C5orf22Q49AR2 442 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 OTOP2Q7RTS6 562 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RBM23Q86U06 439 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM25Q86YD3 366 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ATL1Q8WXF7 558 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PELOQ9BRX2 385 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RHNO1Q9BSD3 238 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 OSGEPL1Q9H4B0 414 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MARCH7Q9H992 704 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SLC52A3Q9NQ40 469 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SH3BGRL2Q9UJC5 107 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 STOML2Q9UJZ1 356 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CFAP20Q9Y6A4 193 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TRBC2A0A5B9 178 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RTCAO00442 366 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TEX28O15482 410 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 WISP3O95389 354 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 F11P03951 625 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 KLK1P06870 262 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 IL3P08700 152 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PET100P0DJ07 73 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CKMT1AP12532 417 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 GSTM2P28161 218 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CDK5R2Q13319 367 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 IRF5Q13568 498 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RGNQ15493 299 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SLC8B1Q6J4K2 584 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TRAF7Q6Q0C0 670 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 LURAP1LQ8IV03 231 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SIPA1Q96FS4 1042 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 P2RY13Q9BPV8 354 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RHBGQ9H310 441 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MRPL22Q9NWU5 206 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TTC34A8MYJ7 566 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 FKTNO75072 461 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 LEFTY1O75610 366 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 STSP08842 583 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 HLA-EP13747 358 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MLLT10P55197 1068 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TPTEP56180 551 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 IL18R1Q13478 541 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ASTLQ6HA08 431 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TNFAIP8L2Q6P589 184 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MSRB3Q8IXL7 192 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 GGHQ92820 318 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 KLK6Q92876 244 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 REPS1Q96D71 796 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 NLNQ9BYT8 704 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ACTL8Q9H568 366 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ZDHHC4Q9NPG8 344 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MIEF1Q9NQG6 463 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 KLHL20Q9Y2M5 609 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 HMX3A6NHT5 357 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PDZK1P1A8MUH7 402 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 GAPDHSO14556 408 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 OR10H3O60404 316 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TPST2O60704 377 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PCDH8O95206 1070 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 HSD3B1P14060 373 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CRHBPP24387 322 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 OPRL1P41146 370 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 GSTM5P46439 218 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PHC1P78364 1004 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RCAN2Q14206 197 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ARMCX4Q5H9R4 360 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PTRH1Q86Y79 214 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CFAP206Q8IYR0 622 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SLC34A3Q8N130 599 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ZBTB8BQ8NAP8 495 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 DNAJB8Q8NHS0 232 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 PCDHGA10Q9Y5H3 936 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 H3BN98 237 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RGS5O15539 181 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CBFA2T3O75081 653 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 DNTTP04053 509 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SBK2P0C263 348 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CCDC159P0C7I6 412 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 C7P10643 843 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 LHCGRP22888 699 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 GADD45AP24522 165 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 GP2P55259 537 aaKnown RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF385BQ569K4 471 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 TJAP1Q5JTD0 557 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 ZDHHC20Q5W0Z9 365 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CBLL1Q75N03 491 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RRM2BQ7LG56 351 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 CYP4Z1Q86W10 505 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 NAV1Q8NEY1 1877 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 DOK4Q8TEW6 326 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 RAB8BQ92930 207 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SH3YL1Q96HL8 342 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 XKR8Q9H6D3 395 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SP140LQ9H930 580 aa4.76□□□□□ -1.65
SMAD4-202ENST00000398417 MBD1Q9UIS9 605 aaPredicted RBP4.76□□□□□ -1.65
SMAD4-202ENST00000398417 SBF2Q86WG5 1849 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms