RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TMIGD1Q6UXZ0 262 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ZCCHC7Q8N3Z6 543 aaKnown RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 HUS1BQ8NHY5 278 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 FKBP10Q96AY3 582 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 CDK15Q96Q40 435 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ACPTQ9BZG2 426 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 STRADBQ9C0K7 418 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
NUP98-205ENST00000397007 LANCL2Q9NS86 450 aa10.08□□□□□ -0.8
NUP98-205ENST00000397007 MANBAO00462 879 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 CCNT2O60583 730 aaKnown RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 GALR3O60755 368 aaPredicted RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 NSA2O95478 260 aaKnown RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 JUNP05412 331 aaKnown RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 CDH3P22223 829 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 MEF2AQ02078 507 aaPredicted RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 CLN3Q13286 438 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 KRT33BQ14525 404 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 ABHD17CQ6PCB6 329 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 MDM1Q8TC05 714 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 SKA2Q8WVK7 121 aaPredicted RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 MEAF6Q9HAF1 191 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 FARSBQ9NSD9 589 aaKnown RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 ADAM29Q9UKF5 820 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 PLPP1O14494 284 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 ZSCAN9O15535 394 aaPredicted RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 GRK2P25098 689 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 STAT5AP42229 794 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 HTR6P50406 440 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 TMPRSS11BQ86T26 416 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 ASPGQ86U10 573 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 METTL4Q8N3J2 472 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 NKD1Q969G9 470 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 KCNA7Q96RP8 456 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 NPLQ9BXD5 320 aaPredicted RBP10.07□□□□□ -0.8
NUP98-205ENST00000397007 KCNK13Q9HB14 408 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 ACSS2Q9NR19 701 aa10.07□□□□□ -0.8
NUP98-205ENST00000397007 LSM1O15116 133 aaKnown RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 PDYNP01213 254 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 GFAPP14136 432 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 CHN1P15882 459 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 ABCE1P61221 599 aaKnown RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 TCHHL1Q5QJ38 904 aaPredicted RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 CEACAM20Q6UY09 585 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 PRSS41Q7RTY9 318 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 CUZD1Q86UP6 607 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 TMEM151BQ8IW70 566 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 GAL3ST3Q96A11 431 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 AIF1LQ9BQI0 150 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 WDR54Q9H977 334 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 AKIRIN1Q9H9L7 192 aaPredicted RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 PPIEQ9UNP9 301 aaKnown RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 GOLGA4Q13439 2230 aaKnown RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 A0A087WV48 116 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 CYR61O00622 381 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 ANKRD28O15084 1053 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 UROSP10746 265 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 CDH13P55290 713 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 GABREP78334 506 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 BST1Q10588 318 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 ABRAXAS2Q15018 415 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 ZRSR2Q15696 482 aaKnown RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 WASHC2DQ5SRD0 308 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 GPRIN3Q6ZVF9 776 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 RNF175Q8N4F7 328 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 DTWD1Q8N5C7 304 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 FAM76AQ8TAV0 307 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 ZNF75CPQ92670 426 aaPredicted RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 MAGEB18Q96M61 343 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 EGFL8Q99944 293 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 CES1P1Q9UKY3 287 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 DYRK1BQ9Y463 629 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 ASB4Q9Y574 426 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 TMEM150CB9EJG8 249 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 OR4F21O95013 312 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 SLC5A2P31639 672 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 HK2P52789 917 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 TMEM35AQ53FP2 167 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 DEPDC1Q5TB30 811 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 FRG2Q64ET8 278 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 CYB5D1Q6P9G0 228 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 SCUBE1Q8IWY4 988 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 KCT2Q8NC54 265 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 TRPV3Q8NET8 790 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 C3orf30Q96M34 536 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 FRG2BQ96QU4 278 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 SELENOSQ9BQE4 189 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 SEMA4BQ9NPR2 832 aaPredicted RBP10.06□□□□□ -0.8
NUP98-205ENST00000397007 PCDHGA11Q9Y5H2 935 aa10.06□□□□□ -0.8
NUP98-205ENST00000397007 TBX19O60806 448 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 NR1D1P20393 614 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 BGNP21810 368 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 TPP2P29144 1249 aaPredicted RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 FRKP42685 505 aaPredicted RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 XKR6Q5GH73 641 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 PRAMEF17Q5VTA0 474 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 KHDRBS2Q5VWX1 349 aaKnown RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 MED27Q6P2C8 311 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 HOMEZQ8IX15 550 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms