RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 GPATCH1Q9BRR8 931 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CCDC106Q9BWC9 280 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ASIC5Q9NY37 505 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CD207Q9UJ71 328 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR51F1A6NGY5 319 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RHPN2P1A8MT19 583 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 E7ENX8 843 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GJA1P17302 382 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KDELR2P33947 212 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ALDH3A2P51648 485 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CAPZA1P52907 286 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TBPL1P62380 186 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TAP2Q03519 686 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF77Q15935 545 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF311Q5JNZ3 666 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 LINC00299Q6ZSB3 139 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HDDC2Q7Z4H3 204 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PIM3Q86V86 326 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PARGQ86W56 976 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 L3MBTL4Q8NA19 623 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR52B6Q8NGF0 335 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 S100ZQ8WXG8 99 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR5P2Q8WZ92 322 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PYCR2Q96C36 320 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ABHD8Q96I13 439 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TPD52L3Q96J77 140 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 UNKQ9C0B0 810 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GSTO2Q9H4Y5 243 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ACTL8Q9H568 366 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GEMIN8Q9NWZ8 242 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ADAM30Q9UKF2 790 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PDE10AQ9Y233 779 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM5Q9Y2B1 443 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HELZP42694 1942 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BMP2P12643 396 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RPP38P78345 283 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PTSQ03393 145 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BLMHQ13867 455 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CCDC142Q17RM4 750 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PROX2Q3B8N5 592 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 YOD1Q5VVQ6 348 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SH2D5Q6ZV89 423 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 AMIGO1Q86WK6 493 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ZCCHC7Q8N3Z6 543 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR52E4Q8NGH9 312 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HMGB4Q8WW32 186 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SCAMP4Q969E2 229 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 COL26A1Q96A83 441 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OLFM1Q99784 485 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ADI1Q9BV57 179 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 FANCFQ9NPI8 374 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SRPK3Q9UPE1 567 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CCL22O00626 93 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 POLR1CO15160 346 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ADAM12O43184 909 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KLK8O60259 260 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PFDN1O60925 122 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SLC25A12O75746 678 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GABBR2O75899 941 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BCL10O95999 233 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 F3P13726 295 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TNNI3P19429 210 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GCAP28676 217 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 METRNLQ641Q3 311 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR52E8Q6IFG1 317 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PNCKQ6P2M8 343 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SPESP1Q6UW49 350 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 IQCHQ86VS3 1027 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KBTBD8Q8NFY9 601 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 Q9N2J8 555 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 AIG1Q9NVV5 245 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TSC22D4Q9Y3Q8 395 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 IGLV3-16A0A075B6K0 115 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 LOC730098B7Z3J9 87 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MYL12BO14950 172 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OR10H3O60404 316 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ACP5P13686 325 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CD247P20963 164 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TUBA1BP68363 451 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NRF1Q16656 503 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TUBA1AQ71U36 451 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 THAP5Q7Z6K1 395 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FAM47BQ8NA70 645 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF483Q8TF39 744 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NDC1Q9BTX1 674 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 FNDC11Q9BVV2 318 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 CHID1Q9BWS9 393 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 MRPS26Q9BYN8 205 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 NOL6Q9H6R4 1146 aaKnown RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM27Q9HBJ8 222 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 STOX2Q9P2F5 926 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 GMPPBQ9Y5P6 360 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 TARM1B6A8C7 271 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 HIST1H2ABP04908 130 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 ASGR2P07307 311 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OCM2P0CE71 109 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 OCMP0CE72 109 aaPredicted RBP3.26□□□□□ -1.89
VPS13C-203ENST00000395896 PSMD7P51665 324 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 UBXN2BQ14CS0 331 aa3.26□□□□□ -1.89
VPS13C-203ENST00000395896 EML3Q32P44 896 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms