RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PLAG1Q6DJT9 500 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 CPEB2Q7Z5Q1 589 aaKnown RBP15.25■□□□□ 0.03
CXCL12-206ENST00000395795 PALM2Q8IXS6 379 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 KLHDC8AQ8IYD2 350 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 PLPP5Q8NEB5 264 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 OR1N1Q8NGS0 311 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 GABPB2Q8TAK5 448 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-206ENST00000395795 SLC5A11Q8WWX8 675 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 ANP32BQ92688 251 aaKnown RBP15.25■□□□□ 0.03
CXCL12-206ENST00000395795 SMIM10Q96HG1 83 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 TUBB6Q9BUF5 446 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 FAM129AQ9BZQ8 928 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 RNF32Q9H0A6 362 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 SVILO95425 2214 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 ZGRF1Q86YA3 2104 aa15.25■□□□□ 0.03
CXCL12-206ENST00000395795 OR1F1O43749 312 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 MAN1A2O60476 641 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 DDAH2O95865 285 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 TBX6O95947 436 aaPredicted RBP15.24■□□□□ 0.03
CXCL12-206ENST00000395795 HIST1H2AGP0C0S8 130 aaPredicted RBP15.24■□□□□ 0.03
CXCL12-206ENST00000395795 HIST1H2ADP20671 130 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 SLC6A12P48065 614 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 CDKL1Q00532 357 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 THOC6Q86W42 341 aaKnown RBP15.24■□□□□ 0.03
CXCL12-206ENST00000395795 UTP15Q8TED0 518 aaKnown RBP15.24■□□□□ 0.03
CXCL12-206ENST00000395795 CREB3L4Q8TEY5 395 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 TSLPQ969D9 159 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 VPS39Q96JC1 886 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 HIST1H2AHQ96KK5 128 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 TSNARE1Q96NA8 513 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 HIST1H2AJQ99878 128 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 H2AFJQ9BTM1 129 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 SLC6A16Q9GZN6 736 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 RHOJQ9H4E5 214 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 KLHL31Q9H511 634 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 ANKHQ9HCJ1 492 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 ZFATQ9P243 1243 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 ZFP69BQ9UJL9 534 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 MTO1Q9Y2Z2 717 aaKnown RBP15.24■□□□□ 0.03
CXCL12-206ENST00000395795 UNC79Q9P2D8 2635 aa15.24■□□□□ 0.03
CXCL12-206ENST00000395795 CROCCQ5TZA2 2017 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 NDUFS4O43181 175 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 RAD51CO43502 376 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 EDN3P14138 238 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 SSTR1P30872 391 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 GPX6P59796 221 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 OLR1P78380 273 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 TRADDQ15628 312 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 TSNQ15631 228 aaKnown RBP15.23■□□□□ 0.03
CXCL12-206ENST00000395795 MINDY4Q4G0A6 757 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 ZBED8Q8IZ13 594 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
CXCL12-206ENST00000395795 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 ATL1Q8WXF7 558 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 PEX11GQ96HA9 241 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 ERP44Q9BS26 406 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 RBCK1Q9BYM8 510 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 PELI2Q9HAT8 420 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 AGPAT4Q9NRZ5 378 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 RNF14Q9UBS8 474 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 SLC22A14Q9Y267 594 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 SLC5A6Q9Y289 635 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 OARD1Q9Y530 152 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 CLDN16Q9Y5I7 305 aa15.23■□□□□ 0.03
CXCL12-206ENST00000395795 TRAV17A0A0B4J275 112 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 A1L4Q6 167 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 TAPBPO15533 448 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 CHST10O43529 356 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 SLC35G6P0C7Q6 338 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 ZNF888P0CJ79 500 aaPredicted RBP15.22■□□□□ 0.03
CXCL12-206ENST00000395795 ALOX12P18054 663 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 SAT1P21673 171 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 COL8A1P27658 744 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 AHRP35869 848 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 GMPRP36959 345 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 GDF5P43026 501 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 ARG2P78540 354 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 SRSF11Q05519 484 aaKnown RBP15.22■□□□□ 0.03
CXCL12-206ENST00000395795 HERC3Q15034 1050 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 DEFB134Q4QY38 66 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 NXPE4Q6UWF7 544 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 SLCO4C1Q6ZQN7 724 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 NKAPQ8N5F7 415 aaKnown RBP15.22■□□□□ 0.03
CXCL12-206ENST00000395795 RHBDF1Q96CC6 855 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 OR1F2PQ96R84 312 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 TMEM79Q9BSE2 394 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 TRIM54Q9BYV2 358 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 UNKQ9C0B0 810 aaKnown RBP15.22■□□□□ 0.03
CXCL12-206ENST00000395795 CAB39LQ9H9S4 337 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 WHRNQ9P202 907 aa15.22■□□□□ 0.03
CXCL12-206ENST00000395795 IGKV3D-11A0A0A0MRZ8 115 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 FAM159BA6NKW6 160 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 MAGEB17A8MXT2 336 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 CDC123O75794 336 aaPredicted RBP15.21■□□□□ 0.03
CXCL12-206ENST00000395795 WFS1O76024 890 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 FHP07954 510 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 ICAM2P13598 275 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 MST1P26927 711 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 GRK3P35626 688 aa15.21■□□□□ 0.03
CXCL12-206ENST00000395795 PAFAH1B1P43034 410 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms