RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 OGFOD2Q6N063 350 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 AMIGO1Q86WK6 493 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 C17orf82Q86X59 251 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 SYT12Q8IV01 421 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 RBM12BQ8IXT5 1001 aaKnown RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 FAM181AQ8N9Y4 354 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 OR4K1Q8NGD4 311 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 OR2A1Q8NGT9 310 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 SLC5A11Q8WWX8 675 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 CCDC106Q9BWC9 280 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ZNF385DQ9H6B1 395 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 XKR8Q9H6D3 395 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 PFDN2Q9UHV9 154 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ZFP69BQ9UJL9 534 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 SNX6Q9UNH7 406 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 SH2B3Q9UQQ2 575 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 BTRCQ9Y297 605 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 TSC22D4Q9Y3Q8 395 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 PTGDR2Q9Y5Y4 395 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 CSNK1G3Q9Y6M4 447 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 PCM1Q15154 2024 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 FANCMQ8IYD8 2048 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 CACNA1EQ15878 2313 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 TRBV23OR9-2A0A075B6M9 112 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 E9PBE3 544 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 NPIPB8E9PQR5 432 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 AGRPO00253 132 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 AQP9O43315 295 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 KLHL41O60662 606 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 PIAS2O75928 621 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 VIPP01282 170 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 HMOX2P30519 316 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ADSLP30566 484 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 HTR6P50406 440 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 IRX1P78414 480 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 PRDX1Q06830 199 aaKnown RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 BNIP1Q12981 228 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 KRT72Q14CN4 511 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 LACTB2Q53H82 288 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 CATSPEREQ5SY80 951 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 C10orf62Q5T681 223 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 FRG2Q64ET8 278 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 GRHL2Q6ISB3 625 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 IL27RAQ6UWB1 636 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 JAZF1Q86VZ6 243 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 FAM129CQ86XR2 697 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 SFTPA2Q8IWL1 248 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 DDIASQ8IXT1 998 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 LAS2Q8IYD9 372 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ADGRF3Q8IZF5 1079 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 C2orf73Q8N5S3 287 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 AVL9Q8NBF6 648 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ZNF548Q8NEK5 533 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 OR2T11Q8NH01 316 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 WDR20Q8TBZ3 569 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 SLC37A2Q8TED4 501 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 LCN9Q8WX39 176 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 PATE1Q8WXA2 126 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 SH3KBP1Q96B97 665 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ERP27Q96DN0 273 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 PRR11Q96HE9 360 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 FRG2BQ96QU4 278 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 FARSBQ9NSD9 589 aaKnown RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 RIC8BQ9NVN3 520 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ZNF490Q9ULM2 529 aaPredicted RBP10.95□□□□□ -0.66
RTN1-203ENST00000395090 PCDHGA2Q9Y5H1 932 aa10.95□□□□□ -0.66
RTN1-203ENST00000395090 ATXN2Q99700 1313 aaKnown RBP10.94□□□□□ -0.66
RTN1-203ENST00000395090 SLC28A1O00337 649 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 FFAR3O14843 346 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 SLC22A2O15244 555 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 GPR42O15529 346 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 LBPP18428 481 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 DPP6P42658 865 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 FASLGP48023 281 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 ABATP80404 500 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 LAPTM5Q13571 262 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 SIM2Q14190 667 aaPredicted RBP10.94□□□□□ -0.66
RTN1-203ENST00000395090 GPR18Q14330 331 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 ANGPT1Q15389 498 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 SMU1Q2TAY7 513 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 C6orf136Q5SQH8 315 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.94□□□□□ -0.66
RTN1-203ENST00000395090 THEMIS2Q5TEJ8 643 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 TMEM198Q66K66 360 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 SCIMPQ6UWF3 145 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 SLC9B2Q86UD5 537 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 C17orf64Q86WR6 236 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 ZDHHC13Q8IUH4 622 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 SLC25A45Q8N413 288 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 OR4E2Q8NGC2 313 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 TUBGCP3Q96CW5 907 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 EFCAB11Q9BUY7 163 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 PITHD1Q9GZP4 211 aaPredicted RBP10.94□□□□□ -0.66
RTN1-203ENST00000395090 SRMSQ9H3Y6 488 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 ELOVL6Q9H5J4 265 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 UCK1Q9HA47 277 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 MRGBPQ9NV56 204 aa10.94□□□□□ -0.66
RTN1-203ENST00000395090 GEMIN8Q9NWZ8 242 aaKnown RBP10.94□□□□□ -0.66
RTN1-203ENST00000395090 PRR13Q9NZ81 148 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms