RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 RGS1Q08116 209 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CDC20Q12834 499 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 HYAL2Q12891 473 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PWP1Q13610 501 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 E2F2Q14209 437 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 TBCCQ15814 346 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 SYT16Q17RD7 645 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CEP85LQ5SZL2 805 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 FAM219BQ5XKK7 198 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PRMT9Q6P2P2 845 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 SHISA6Q6ZSJ9 500 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PDSS2Q86YH6 399 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 OR52B6Q8NGF0 335 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CDK15Q96Q40 435 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 KLHL31Q9H511 634 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 NOL11Q9H8H0 719 aaKnown RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 ACTR8Q9H981 624 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 COPG2Q9UBF2 871 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 LHX6Q9UPM6 363 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CDC14CA4D256 554 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 ZNF860A6NHJ4 632 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 G3V2L1 256 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 SGK494L7N484 410 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PLIN3O60664 434 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 SPAG7O75391 227 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 ZNF888P0CJ79 500 aaPredicted RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 CREB1P16220 341 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 ATP5F1P24539 256 aaPredicted RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 PIK3CGP48736 1102 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 CDH13P55290 713 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PCDH1Q08174 1060 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 FAM53BQ14153 422 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PAGE2BQ5JRK9 111 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 TOR1AIP1Q5JTV8 583 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 OVCH1Q7RTY7 1134 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 GPR155Q7Z3F1 870 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 AMER3Q8N944 861 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 BANPQ8N9N5 519 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 TRPV3Q8NET8 790 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 ZNF483Q8TF39 744 aaPredicted RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 SNRNP27Q8WVK2 155 aaKnown RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 APOPT1Q96IL0 206 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 C17orf62Q9BQA9 187 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 YIPF2Q9BWQ6 316 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 SLC6A16Q9GZN6 736 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 NT5DC2Q9H857 520 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 SEMA4BQ9NPR2 832 aaPredicted RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 GRID1Q9ULK0 1009 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 RNF11Q9Y3C5 154 aa18.91■□□□□ 0.62
SNCA-203ENST00000394986 PTRH2Q9Y3E5 179 aaKnown RBP18.91■□□□□ 0.62
SNCA-203ENST00000394986 CACNA1BQ00975 2339 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 A0A1B0GTL3 188 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 PPP6CO00743 305 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 TBX6O95947 436 aaPredicted RBP18.9■□□□□ 0.62
SNCA-203ENST00000394986 ONECUT2O95948 504 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 PCNAP12004 261 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 HNRNPH1P31943 449 aaKnown RBP18.9■□□□□ 0.62
SNCA-203ENST00000394986 ARL1P40616 181 aaPredicted RBP18.9■□□□□ 0.62
SNCA-203ENST00000394986 RAB8AP61006 207 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 HERVK_113P63132 956 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 LAPTM5Q13571 262 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 DSG2Q14126 1118 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 NKG7Q16617 165 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 UNC50Q53HI1 259 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 ZNF678Q5SXM1 525 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 GRHL2Q6ISB3 625 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 METTL2BQ6P1Q9 378 aaKnown RBP18.9■□□□□ 0.62
SNCA-203ENST00000394986 ZYG11AQ6WRX3 759 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 SYVN1Q86TM6 617 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 PRSS58Q8IYP2 241 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 RNF175Q8N4F7 328 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 FKBP10Q96AY3 582 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 MVB12AQ96EY5 273 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 ERVK-6Q9BXR3 956 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 PITHD1Q9GZP4 211 aaPredicted RBP18.9■□□□□ 0.62
SNCA-203ENST00000394986 CENPHQ9H3R5 247 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 SOX17Q9H6I2 414 aaPredicted RBP18.9■□□□□ 0.62
SNCA-203ENST00000394986 ANKHQ9HCJ1 492 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 HCN3Q9P1Z3 774 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 CDC14AQ9UNH5 594 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 NAALAD2Q9Y3Q0 740 aa18.9■□□□□ 0.62
SNCA-203ENST00000394986 A0A0G2JN53 185 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 ANKDD1BA6NHY2 528 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 CTIFO43310 598 aaKnown RBP18.89■□□□□ 0.61
SNCA-203ENST00000394986 RDH16O75452 317 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 KLHL18O94889 574 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 NSA2O95478 260 aaKnown RBP18.89■□□□□ 0.61
SNCA-203ENST00000394986 SERPINA6P08185 405 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 MYL2P10916 166 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 PIM1P11309 404 aaPredicted RBP18.89■□□□□ 0.61
SNCA-203ENST00000394986 AVPR1BP47901 424 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 TRAF3Q13114 568 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 RBBP7Q16576 425 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 HIST2H2ACQ16777 129 aaPredicted RBP18.89■□□□□ 0.61
SNCA-203ENST00000394986 CCDC153Q494R4 210 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 DEFB134Q4QY38 66 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 HIST2H2AA3Q6FI13 130 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 MED27Q6P2C8 311 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 AFAP1L2Q8N4X5 818 aa18.89■□□□□ 0.61
SNCA-203ENST00000394986 CCDC63Q8NA47 563 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms