RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 FMO3P31513 532 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 RPL5P46777 297 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 HYAL2Q12891 473 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 CSTF3Q12996 717 aaKnown RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ZXDCQ2QGD7 858 aaPredicted RBP15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 ARMC6Q6NXE6 501 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 FAM46DQ8NEK8 389 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 OR8K5Q8NH50 307 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 PCDHA9Q9Y5H5 950 aa15.29■□□□□ 0.04
SMARCD1-202ENST00000394963 NLRC5Q86WI3 1866 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ERN1O75460 977 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CISD3P0C7P0 127 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CD9P21926 228 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 NTSR1P30989 418 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 OPRD1P41143 372 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CCDC116Q8IYX3 515 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 C8orf59Q8N0T1 100 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 AADATQ8N5Z0 425 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 GLMNQ92990 594 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ZNF514Q96K75 400 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 LYSMD1Q96S90 227 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 SRMSQ9H3Y6 488 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 GEMIN8Q9NWZ8 242 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 GDE1Q9NZC3 331 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CD300AQ9UGN4 299 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CA14Q9ULX7 337 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CDC123O75794 336 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 WISP3O95389 354 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 MPC1LP0DKB6 136 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 PHC1P78364 1004 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 SRSF11Q05519 484 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 DUOXA1Q1HG43 343 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 TBPL2Q6SJ96 375 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 DCUN1D3Q8IWE4 304 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC9A6Q92581 669 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 BTBD9Q96Q07 612 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ABCG4Q9H172 646 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ITM2CQ9NQX7 267 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC25A37Q9NYZ2 338 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 RAB26Q9ULW5 256 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 FNDC1Q4ZHG4 1894 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 PATJQ8NI35 1801 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ABCA7Q8IZY2 2146 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 DOCK8Q8NF50 2099 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 PNMA8CA0A1B0GUJ8 204 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 BCHEP06276 602 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 CSRP3P50461 194 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 PTPN5P54829 565 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 SLC14A1Q13336 389 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 DUSP6Q16828 381 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ABRAXAS1Q6UWZ7 409 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 FAM160A2Q8N612 972 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 METTL27Q8N6F8 245 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 TMEM102Q8N9M5 508 aaPredicted RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 GATA6Q92908 595 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 FBXL8Q96CD0 374 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 EFCAB11Q9BUY7 163 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 ZCCHC3Q9NUD5 404 aaKnown RBP15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 GMPPBQ9Y5P6 360 aa15.28■□□□□ 0.04
SMARCD1-202ENST00000394963 GPR179Q6PRD1 2367 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 B4DGG1 531 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 XPNPEP2O43895 674 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 EGFP01133 1207 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 VIPP01282 170 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 NPPBP16860 134 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 DEFB110Q30KQ9 67 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 DLEU7Q6UYE1 221 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 TECPR1Q7Z6L1 1165 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 MEX3DQ86XN8 651 aaKnown RBP15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 ARL10Q8N8L6 244 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 HSH2DQ96JZ2 352 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 TRAPPC9Q96Q05 1148 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 FAM83CQ9BQN1 747 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 TOR3AQ9H497 397 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 CLK4Q9HAZ1 481 aaKnown RBP15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 PNPLA3Q9NST1 481 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 NDOR1Q9UHB4 597 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 PTPRDP23468 1912 aa15.27■□□□□ 0.04
SMARCD1-202ENST00000394963 SERPINI2O75830 405 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 IGFBP5P24593 272 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 NUDT6P53370 316 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 LIPJQ5W064 366 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 ZNF852Q6ZMS4 543 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 FAM217AQ8IXS0 508 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 C10orf111Q8N326 155 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 GPR174Q9BXC1 333 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 BTBD1Q9H0C5 482 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 KRT84Q9NSB2 600 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 WDR37Q9Y2I8 494 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 HEMK1Q9Y5R4 338 aaPredicted RBP15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 MYLKQ15746 1914 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 ASXL3Q9C0F0 2248 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 KMOO15229 486 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 HSD17B1P14061 328 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 PVRP15151 417 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 HRH2P25021 359 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 ZNF763Q0D2J5 394 aa15.27■□□□□ 0.03
SMARCD1-202ENST00000394963 GPR149Q86SP6 731 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms