RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TMED10P49755 219 aaKnown RBP18.14■□□□□ 0.49
CBX1-202ENST00000393408 TIGD6Q17RP2 521 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 KLHDC8AQ8IYD2 350 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 HS6ST3Q8IZP7 471 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 OR4C15Q8NGM1 316 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 GGHQ92820 318 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 MED8Q96G25 268 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 ABHD8Q96I13 439 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 EMILIN2Q9BXX0 1053 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 FAM8A1Q9UBU6 413 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 PLXNA2O75051 1894 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 CLCA1A8K7I4 914 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 KDM1AO60341 852 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 UPK1BO75841 260 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 MVDP53602 400 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 PCDH1Q08174 1060 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 CCSMST1Q4G0I0 132 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 OR10G2Q8NGC3 310 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 OR4A15Q8NGL6 344 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 ATL1Q8WXF7 558 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 MRPS31Q92665 395 aaKnown RBP18.13■□□□□ 0.49
CBX1-202ENST00000393408 FAM83DQ9H4H8 585 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 AMBNQ9NP70 447 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 ZNF282Q9UDV7 671 aaPredicted RBP18.13■□□□□ 0.49
CBX1-202ENST00000393408 EXO1Q9UQ84 846 aaKnown RBP18.13■□□□□ 0.49
CBX1-202ENST00000393408 PCDHGA2Q9Y5H1 932 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 OR2AG2A6NM03 316 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 HLA-EP13747 358 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 TNFRSF1BP20333 461 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 CDC20Q12834 499 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 ZNF648Q5T619 568 aaPredicted RBP18.13■□□□□ 0.49
CBX1-202ENST00000393408 SLC46A3Q7Z3Q1 461 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 HSD11B1LQ7Z5J1 315 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 OR7G3Q8NG95 312 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 HPS1Q92902 700 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 FOXJ1Q92949 421 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 ERLEC1Q96DZ1 483 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 HEPHQ9BQS7 1158 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 RLIMQ9NVW2 624 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 GPATCH2Q9NW75 528 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 SPASTQ9UBP0 616 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 RAPGEFL1Q9UHV5 662 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 SLCO3A1Q9UIG8 710 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 MYOFQ9NZM1 2061 aa18.13■□□□□ 0.49
CBX1-202ENST00000393408 A0A1W2PQ67 120 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 MGAT4DA6NG13 374 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 RNASET2O00584 256 aaKnown RBP18.12■□□□□ 0.49
CBX1-202ENST00000393408 OPN1SWP03999 348 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ZNF385BQ569K4 471 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 SPIN4Q56A73 249 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 SPOUT1Q5T280 376 aaKnown RBP18.12■□□□□ 0.49
CBX1-202ENST00000393408 TUBA3EQ6PEY2 450 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ARMC8Q8IUR7 673 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 LYSMD2Q8IV50 215 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 GPR156Q8NFN8 814 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 HUS1BQ8NHY5 278 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 TMEM169Q96HH4 297 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 PRDM8Q9NQV8 689 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 SACM1LQ9NTJ5 587 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 SH3BP4Q9P0V3 963 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ISPDA4D126 451 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 TAF4O00268 1085 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 NRG2O14511 850 aaPredicted RBP18.12■□□□□ 0.49
CBX1-202ENST00000393408 TNFRSF21O75509 655 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 CXCL10P02778 98 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 GABRB1P18505 474 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 FUT4P22083 530 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 TIA1P31483 386 aaKnown RBP eCLIP18.12■□□□□ 0.49
CBX1-202ENST00000393408 COLEC12Q5KU26 742 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 COX20Q5RI15 118 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ASTLQ6HA08 431 aaPredicted RBP18.12■□□□□ 0.49
CBX1-202ENST00000393408 GDPD4Q6W3E5 623 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ZNF852Q6ZMS4 543 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 Q6ZVU0 165 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 USP43Q70EL4 1123 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 SLC39A11Q8N1S5 342 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 RAET1EQ8TD07 263 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 NXF2Q9GZY0 626 aaKnown RBP18.12■□□□□ 0.49
CBX1-202ENST00000393408 SP140LQ9H930 580 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 TMEM165Q9HC07 324 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 RAD18Q9NS91 495 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ZNF226Q9NYT6 803 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ANKMY1Q9P2S6 941 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 SLC25A13Q9UJS0 675 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 POFUT2Q9Y2G5 429 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 A3GALT2U3KPV4 340 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 ALPK3Q96L96 1907 aa18.12■□□□□ 0.49
CBX1-202ENST00000393408 AGAP5A6NIR3 686 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 INHAP05111 366 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 ETFAP13804 333 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 ANXA8P13928 327 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 GRK5P34947 590 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 CRATP43155 626 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 BDKRB1P46663 353 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 CCL23P55773 120 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 POLR2LP62875 67 aaKnown RBP18.11■□□□□ 0.49
CBX1-202ENST00000393408 IFI44LQ53G44 452 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 OR56A3Q8NH54 315 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 RAD9AQ99638 391 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 ABCB10Q9NRK6 738 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms