RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PIP5KL1Q5T9C9 394 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 FAM9CQ8IZT9 166 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 IL17RCQ8NAC3 791 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 OR4M2Q8NGB6 313 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 OR4M1Q8NGD0 313 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 CYGBQ8WWM9 190 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 KIAA1191Q96A73 305 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 AP2M1Q96CW1 435 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 COQ10AQ96MF6 247 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 WARS2Q9UGM6 360 aaKnown RBP18.32■□□□□ 0.52
CCDC50-202ENST00000392456 MID2Q9UJV3 735 aa18.32■□□□□ 0.52
CCDC50-202ENST00000392456 KLF2Q9Y5W3 355 aaPredicted RBP18.32■□□□□ 0.52
CCDC50-202ENST00000392456 RGSL1A5PLK6 1076 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 NEMP1O14524 444 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 INPP4BO15327 924 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 RECQL5O94762 991 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 SIX3O95343 332 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 C6P13671 934 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 ENO3P13929 434 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TSPAN8P19075 237 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 NSG1P42857 185 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TNFRSF4P43489 277 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 KPNA2P52292 529 aaKnown RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 MAPK12P53778 367 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TAS2R38P59533 333 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 IL2P60568 153 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 CAMK2GQ13555 558 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TRIM25Q14258 630 aaKnown RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 EPGNQ6UW88 154 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 MACC1Q6ZN28 852 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 ZNF767PQ75MW2 155 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 SFRP1Q8N474 314 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 DSN1Q9H410 356 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TNFRSF12AQ9NP84 129 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 NCF1BA6NI72 391 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 SAC3D1A6NKF1 404 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 NCF1CA8MVU1 366 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 WNT9AO14904 365 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 PTP4A3O75365 173 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 DNAJB5O75953 348 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 HSPA4LO95757 839 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 SOD1P00441 154 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 NCF1P14598 390 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TCN1P20061 433 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 IL12AP29459 219 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 HK3P52790 923 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 DCDC1P59894 354 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 RUNX1T1Q06455 604 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 CST6Q15828 149 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 LYPLAL1Q5VWZ2 237 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 ZDHHC20Q5W0Z9 365 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 LETMD1Q6P1Q0 360 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 NUDT18Q6ZVK8 323 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 ADCK1Q86TW2 530 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 AMIGO1Q86WK6 493 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 CIDECQ96AQ7 238 aaPredicted RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 RCN3Q96D15 328 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 TFB2MQ9H5Q4 396 aaKnown RBP18.31■□□□□ 0.52
CCDC50-202ENST00000392456 DYRK4Q9NR20 520 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 B3GNT2Q9NY97 397 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 ZDHHC2Q9UIJ5 367 aa18.31■□□□□ 0.52
CCDC50-202ENST00000392456 A0A1W2PPC1 479 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 TCRBV3S1A0A5B6 114 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 CPNE3O75131 537 aaKnown RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 CLEC2LP0C7M8 214 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 PCSK2P16519 638 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 CCR7P32248 378 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 CKAP5Q14008 2032 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 PFKFB4Q16877 469 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 SLC9B1Q4ZJI4 515 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 KIAA1324Q6UXG2 1013 aaKnown RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 EPHX4Q8IUS5 362 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 METTL4Q8N3J2 472 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 NKAPQ8N5F7 415 aaKnown RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 DTD2Q96FN9 168 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 PPP1R16AQ96I34 528 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 TRAF4Q9BUZ4 470 aaPredicted RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 ALOXE3Q9BYJ1 711 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 PITHD1Q9GZP4 211 aaPredicted RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 INTS7Q9NVH2 962 aaKnown RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 EMC3Q9P0I2 261 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 MUC3AQ02505 3323 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 C1QTNF3-AMACRE9PGA6 284 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 PPP6CO00743 305 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 DDCP20711 480 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 COL9A1P20849 921 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 MAGP20916 626 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 AKT1P31749 480 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 TMEM236Q5W0B7 351 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 ERMP1Q7Z2K6 904 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 TAGAPQ8N103 731 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 SVOPQ8N4V2 548 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 TRAM1L1Q8N609 369 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 FAM83FQ8NEG4 500 aaPredicted RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 RHEBL1Q8TAI7 183 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 RBM14Q96PK6 669 aaKnown RBP18.3■□□□□ 0.52
CCDC50-202ENST00000392456 MIR1-1HGQ9H1L0 117 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 FBXL12Q9NXK8 326 aa18.3■□□□□ 0.52
CCDC50-202ENST00000392456 BAG5Q9UL15 447 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms