RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ZNF548Q8NEK5 533 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 PEX13Q92968 403 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 MAELQ96JY0 434 aaKnown RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 NPY6RQ99463 290 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 PKP4Q99569 1192 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 BCL2L14Q9BZR8 327 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 TREM1Q9NP99 234 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 LAMB4A4D0S4 1761 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 A0A096LPI6 279 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 LEPRP48357 1165 aaKnown RBP19.08■□□□□ 0.65
SHANK1-203ENST00000391813 CDH11P55287 796 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 CD47Q08722 323 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 RAB12Q6IQ22 244 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 RPS27LQ71UM5 84 aaKnown RBP19.08■□□□□ 0.65
SHANK1-203ENST00000391813 BEX2Q9BXY8 128 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 SACM1LQ9NTJ5 587 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 HAS3O00219 553 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 PI15O43692 258 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 PRMT3O60678 531 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 HK1P19367 917 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 PSMA6P60900 246 aaKnown RBP19.08■□□□□ 0.65
SHANK1-203ENST00000391813 CACUL1Q86Y37 369 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 ZDHHC14Q8IZN3 488 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 THAP6Q8TBB0 222 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 TMEM181Q9P2C4 612 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 ZNF451Q9Y4E5 1061 aa19.08■□□□□ 0.65
SHANK1-203ENST00000391813 LRRN3E7EW58 273 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 TPST2O60704 377 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 MATN4O95460 622 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 SYN1P17600 705 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 TCEA1P23193 301 aaKnown RBP19.08■□□□□ 0.64
SHANK1-203ENST00000391813 WDR45BQ5MNZ6 344 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 FAAH2Q6GMR7 532 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 SLC7A5P1Q8MH63 180 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 CHST4Q8NCG5 386 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 RPLP0P6Q8NHW5 317 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 CMTM7Q96FZ5 175 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 TMED9Q9BVK6 235 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 LRRN3Q9H3W5 708 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 BRD7Q9NPI1 651 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 HCN3Q9P1Z3 774 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 MRPS33Q9Y291 106 aaKnown RBP19.08■□□□□ 0.64
SHANK1-203ENST00000391813 MYH6P13533 1939 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 NEDD8-MDP1E9PL57 170 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 PRKYO43930 277 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 LAPTM4AQ15012 233 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 TIGD5Q53EQ6 642 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 SNAP47Q5SQN1 464 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 UBQLNLQ8IYU4 475 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 DNASE1L2Q92874 299 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 FCRL3Q96P31 734 aaPredicted RBP19.08■□□□□ 0.64
SHANK1-203ENST00000391813 LGR4Q9BXB1 951 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 P2RX2Q9UBL9 471 aa19.08■□□□□ 0.64
SHANK1-203ENST00000391813 C9IYK1 514 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 ZNF782Q6ZMW2 699 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-203ENST00000391813 SERINC5Q86VE9 423 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 NR4A3Q92570 626 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 SLC9A6Q92581 669 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 ZNF354BQ96LW1 612 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 CCSER2Q9H7U1 834 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 TMEM45AQ9NWC5 275 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 EXTL2Q9UBQ6 330 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 NME4O00746 187 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 XKRYO14609 159 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 TEX28O15482 410 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 GGT5P36269 586 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 EFR3AQ14156 821 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 SPHARQ15513 63 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 SMARCD3Q6STE5 483 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 PAQR7Q86WK9 346 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 LILRB4Q8NHJ6 448 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 RERGQ96A58 199 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-203ENST00000391813 RANBP9Q96S59 729 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 HERPUD2Q9BSE4 406 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 GPN2Q9H9Y4 310 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-203ENST00000391813 SLC27A6Q9Y2P4 619 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 EPOP01588 193 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 GRB7Q14451 532 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 PGM2L1Q6PCE3 622 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 GDPGP1Q6ZNW5 385 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 Q6ZNX1 250 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 ATCAYQ86WG3 371 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 VWA5B2Q8N398 1253 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 KDM1BQ8NB78 822 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 TP63Q9H3D4 680 aaPredicted RBP19.07■□□□□ 0.64
SHANK1-203ENST00000391813 ERVK13-1Q9NX77 482 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 TAS2R10Q9NYW0 307 aa19.07■□□□□ 0.64
SHANK1-203ENST00000391813 SLC38A8A6NNN8 435 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 OR4D2P58180 307 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 VMACQ2NL98 169 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 DCP2Q8IU60 420 aaKnown RBP19.06■□□□□ 0.64
SHANK1-203ENST00000391813 NPAS3Q8IXF0 933 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 DEDD2Q8WXF8 326 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 KCNJ9Q92806 393 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 A0A1W2PRQ8 180 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 S100A2P29034 98 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 KDELR2P33947 212 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 SDR16C5Q8N3Y7 309 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 TCEANCQ8N8B7 351 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 OR10Q1Q8NGQ4 319 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms