RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CASP10Q92851 521 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 PYCR2Q96C36 320 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 NXPE2Q96DL1 559 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 RBM41Q96IZ5 413 aaKnown RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 CYYR1Q96J86 154 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 SPATA33Q96N06 139 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 LRRC3BQ96PB8 259 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 TAAR6Q96RI8 345 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 CCDC68Q9H2F9 335 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 RIMS4Q9H426 269 aaPredicted RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 CLIP2Q9UDT6 1046 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 PRO0461Q9UI25 63 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 FBXL4Q9UKA2 621 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 POMT2Q9UKY4 750 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 ZNF256Q9Y2P7 627 aaPredicted RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 COL16A1Q07092 1604 aaPredicted RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 hCG_38984A0A1B0GV85 526 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 RPL37AP8A6NKH3 93 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 H3BMM5 538 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 RNF103O00237 685 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 SH3BGRLO75368 114 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 VENTXO95231 258 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 ADORA3P0DMS8 318 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 SFTPDP35247 375 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 RBPJQ06330 500 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 MLF2Q15773 248 aaPredicted RBP2.45□□□□□ -2.02
TRAV40-201ENST00000390467 FGD3Q5JSP0 725 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 SPANXN4Q5MJ08 99 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 FHL5Q5TD97 284 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 KRT39Q6A163 491 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 FAM166AQ6J272 317 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 NAA16Q6N069 864 aaPredicted RBP2.45□□□□□ -2.02
TRAV40-201ENST00000390467 MZT2BQ6NZ67 158 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 PRSS55Q6UWB4 352 aaPredicted RBP2.45□□□□□ -2.02
TRAV40-201ENST00000390467 CCBE1Q6UXH8 406 aaPredicted RBP2.45□□□□□ -2.02
TRAV40-201ENST00000390467 Q6ZVH6 145 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 PIGWQ7Z7B1 504 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 DND1Q8IYX4 353 aaKnown RBP2.45□□□□□ -2.02
TRAV40-201ENST00000390467 MAML2Q8IZL2 1156 aaPredicted RBP2.45□□□□□ -2.02
TRAV40-201ENST00000390467 TTC30BQ8N4P2 665 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 AGAP11Q8TF27 550 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 SPSB1Q96BD6 273 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 ANAPC11Q9NYG5 84 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 KLK11Q9UBX7 282 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 HEG1Q9ULI3 1381 aa2.45□□□□□ -2.02
TRAV40-201ENST00000390467 NPHP3Q7Z494 1330 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 A8MVM7 634 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 PDHXO00330 501 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 SIGLEC5O15389 551 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 MTRF1O75570 445 aaKnown RBP2.44□□□□□ -2.02
TRAV40-201ENST00000390467 RECQL5O94762 991 aaPredicted RBP2.44□□□□□ -2.02
TRAV40-201ENST00000390467 NR2F1P10589 423 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 IFI35P80217 286 aaPredicted RBP2.44□□□□□ -2.02
TRAV40-201ENST00000390467 ACY1Q03154 408 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 CACNG1Q06432 222 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 Q1RN00 199 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 RBPMS2Q6ZRY4 209 aaKnown RBP2.44□□□□□ -2.02
TRAV40-201ENST00000390467 XXYLT1Q8NBI6 393 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 POGLUT1Q8NBL1 392 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 OR5M9Q8NGP3 310 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 SEPT1Q8WYJ6 367 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 NABP1Q96AH0 204 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 ZIM3Q96PE6 472 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 CLEC5AQ9NY25 188 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 NYAP2Q9P242 653 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 SPATA31D1Q6ZQQ2 1576 aa2.44□□□□□ -2.02
TRAV40-201ENST00000390467 IL16Q14005 1332 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 TRGV8A0A0C4DH27 118 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 A8MU76 341 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 TNFSF12O43508 249 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 YES1P07947 543 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 FAM200BP0CF97 657 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 STAG3L1P0CL83 205 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ZNF19P17023 458 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ACHEP22303 614 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 EEF1B2P24534 225 aaKnown RBP2.43□□□□□ -2.02
TRAV40-201ENST00000390467 MTCP1P56278 107 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 CLDN17P56750 224 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 LYZP61626 148 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 RUNX3Q13761 415 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 BECN1Q14457 450 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 RBBP7Q16576 425 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ATAD3CQ5T2N8 411 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ERMARDQ5T6L9 678 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 TTC27Q6P3X3 843 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 RPAINQ86UA6 219 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ITLN1Q8WWA0 313 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 SERAC1Q96JX3 654 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 LURAP1Q96LR2 239 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 HNRNPABQ99729 332 aaKnown RBP2.43□□□□□ -2.02
TRAV40-201ENST00000390467 LRRCC1Q9C099 1032 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 FZD8Q9H461 694 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 RNF121Q9H920 327 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 XAB2Q9HCS7 855 aaKnown RBP2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ABCD2Q9UBJ2 740 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 POLKQ9UBT6 870 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 ZNF346Q9UL40 294 aaKnown RBP2.43□□□□□ -2.02
TRAV40-201ENST00000390467 NAALAD2Q9Y3Q0 740 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 COLEC10Q9Y6Z7 277 aa2.43□□□□□ -2.02
TRAV40-201ENST00000390467 TDRD6O60522 2096 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms