RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ATP6V1G3Q96LB4 118 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 CCDC17Q96LX7 622 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 FCRL4Q96PJ5 515 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 LMF2Q9BU23 707 aaKnown RBP6.08□□□□□ -1.44
TRAV35-201ENST00000390462 CDK19Q9BWU1 502 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 LHPPQ9H008 270 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 Q9N2K0 584 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 KLHL13Q9P2N7 655 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 MALT1Q9UDY8 824 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 GAGE2DQ9UEU5 116 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 NOCTQ9UK39 431 aaKnown RBP6.08□□□□□ -1.44
TRAV35-201ENST00000390462 RUVBL2Q9Y230 463 aaKnown RBP6.08□□□□□ -1.44
TRAV35-201ENST00000390462 RAP2CQ9Y3L5 183 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 NAIPQ13075 1403 aa6.08□□□□□ -1.44
TRAV35-201ENST00000390462 PFASO15067 1338 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 KIF7Q2M1P5 1343 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 LOC100653049A0A140TA62 436 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 MBLAC1A4D2B0 266 aaPredicted RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ACOD1A6NK06 481 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 BECN2A8MW95 431 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 F8W810 466 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 SLC22A2O15244 555 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ECE2O60344 883 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 WBP4O75554 376 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ATP6AP2O75787 350 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 KRT34O76011 436 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CA3P07451 260 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CHRNGP07510 517 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 NUDT17P0C025 328 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 C1QTNF9P0C862 333 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 SP9P0CG40 484 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 S1PR1P21453 382 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 DDX6P26196 483 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ARRB2P32121 409 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 DCTDP32321 178 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ABCG1P45844 678 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CEBPDP49716 269 aaPredicted RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 RGS4P49798 205 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 MMP15P51511 669 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 RAD23BP54727 409 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CSNK2A1P68400 391 aaPredicted RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CAP1Q01518 475 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CNTN2Q02246 1040 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 VEZF1Q14119 521 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 KCNA10Q16322 511 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 DECR1Q16698 335 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 EIF2S3LQ2VIR3 472 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 BEAN1Q3B7T3 259 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CERKLQ49MI3 558 aaPredicted RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 TAF3Q5VWG9 929 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 SUSD4Q5VX71 490 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 RBM44Q6ZP01 1051 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 FAM131BQ86XD5 332 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 BEST3Q8N1M1 668 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 UBE2J2Q8N2K1 259 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 RYBPQ8N488 228 aaPredicted RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CSNK2A3Q8NEV1 391 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 LILRB4Q8NHJ6 448 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ZNF398Q8TD17 642 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 NCLNQ969V3 563 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 DHX58Q96C10 678 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 LRRC39Q96DD0 335 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 FCRL5Q96RD9 977 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 NTMT1Q9BV86 223 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 KLC2Q9H0B6 622 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ZNF768Q9H5H4 540 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 ZDHHC6Q9H6R6 413 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 MED20Q9H944 212 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 MMP25Q9NPA2 562 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 RCC2Q9P258 522 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 CRLS1Q9UJA2 301 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 PLCL2Q9UPR0 1127 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 KLK4Q9Y5K2 254 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 PEAK1Q9H792 1746 aa6.07□□□□□ -1.44
TRAV35-201ENST00000390462 PARP4Q9UKK3 1724 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 PHRF1Q9P1Y6 1649 aaKnown RBP6.07□□□□□ -1.44
TRAV35-201ENST00000390462 KIAA1217Q5T5P2 1943 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 A0A1B0GTQ1 180 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 FAM240BA0A1B0GVZ2 78 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 PIPSLA2A3N6 862 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 MEI4A8MW99 385 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 SPECC1L-ADORA2AF8WAN1 911 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 STMND1H3BQB6 276 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 NVLO15381 856 aaKnown RBP6.06□□□□□ -1.44
TRAV35-201ENST00000390462 ZNF264O43296 627 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 FOXD2O60548 495 aaPredicted RBP6.06□□□□□ -1.44
TRAV35-201ENST00000390462 DNAJB6O75190 326 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 NDUFA10O95299 355 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 CYP1A2P05177 515 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 MMP3P08254 477 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 STAG3L1P0CL83 205 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 GNSP15586 552 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 DPP4P27487 766 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 PRDX2P32119 198 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 DLSTP36957 453 aa6.06□□□□□ -1.44
TRAV35-201ENST00000390462 NUP62P37198 522 aaPredicted RBP6.06□□□□□ -1.44
TRAV35-201ENST00000390462 EIF2S3P41091 472 aaKnown RBP6.06□□□□□ -1.44
TRAV35-201ENST00000390462 APOBEC1P41238 236 aaKnown RBP6.06□□□□□ -1.44
TRAV35-201ENST00000390462 COMPP49747 757 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms