RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 LRRC31Q6UY01 552 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TMTC3Q6ZXV5 915 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IKBIPQ70UQ0 350 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CEP57Q86XR8 500 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 KRTAP13-1Q8IUC0 172 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF547Q8IVP9 402 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 RCOR2Q8IZ40 523 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 CEND1Q8N111 149 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 WDTC1Q8N5D0 677 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TPRX1Q8N7U7 411 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 LRTM2Q8N967 370 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 OR4C15Q8NGM1 316 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 OR5M9Q8NGP3 310 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 OR1B1Q8NGR6 318 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 GANCQ8TET4 914 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ROBO4Q8WZ75 1007 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 HDAC2Q92769 488 aaKnown RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IL22RA2Q969J5 263 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TSACCQ96A04 125 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 C11orf52Q96A22 123 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SLAMF9Q96A28 289 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 EXOC4Q96A65 974 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SPDL1Q96EA4 605 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SAT2Q96F10 170 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ZBED6CLQ96FA7 236 aaPredicted RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PGAM5Q96HS1 289 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MS4A10Q96PG2 267 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 KLHL5Q96PQ7 755 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 BTBD9Q96Q07 612 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TNFRSF13CQ96RJ3 184 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TBX15Q96SF7 602 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 IL12RB2Q99665 862 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PAXXQ9BUH6 204 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 MXD3Q9BW11 206 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PAPOLGQ9BWT3 736 aaKnown RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 RNF121Q9H920 327 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 NTN4Q9HB63 628 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 WASH6PQ9NQA3 447 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 DIAPH3Q9NSV4 1193 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ARHGEF38Q9NXL2 777 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 PKD2L2Q9NZM6 624 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 POLKQ9UBT6 870 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ITGA11Q9UKX5 1188 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 RNF150Q9ULK6 438 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 ABT1Q9ULW3 272 aaKnown RBP0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SPATA2Q9UM82 520 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 SPATA31D1Q6ZQQ2 1576 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 RNF123Q5XPI4 1314 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 NPHP3Q7Z494 1330 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 TNRQ92752 1358 aa0.3□□□□□ -2.36
SNORD28-201ENST00000384706 GTF3C1Q12789 2109 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CFAP65Q6ZU64 1925 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TRBV5-4A0A0C4DH59 114 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 A0A0U1RQK1 487 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 LOC390937A0A1W2PQ73 354 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 LRCOL1A6NCL2 159 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 FAM231BA6NCW3 169 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CCT8L1PA6NM43 557 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SERPINE3A8MV23 424 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 A8MV72 311 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF487B1APH4 448 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 C2CD4DB7Z1M9 353 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TCP10L2B9ZVM9 353 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SAP18O00422 153 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SIGLEC5O15389 551 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 IPO8O15397 1037 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SNX3O60493 162 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RPS6KA5O75582 802 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RTN3O95197 1032 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 WISP3O95389 354 aaPredicted RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 DDX58O95786 925 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 IGHG1P01857 330 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 HCKP08631 526 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 DANCRP0C864 163 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 DLATP10515 647 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TOP1P11387 765 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PSG2P11465 335 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 F3P13726 295 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PGAM2P15259 253 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PSMA4P25789 261 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RPA1P27694 616 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RPL9P32969 192 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 SFTPDP35247 375 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ARL3P36405 182 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 FEN1P39748 380 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PMELP40967 661 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ALDH3B1P43353 468 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 MAGEA9P43362 315 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 TRPC1P48995 793 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 P2RY4P51582 365 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ALDH3A2P51648 485 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 ZNF75DP51815 510 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 NDST1P52848 882 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 EIF5P55010 431 aaKnown RBP0.29□□□□□ -2.36
SNORD28-201ENST00000384706 CDH13P55290 713 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 PEX3P56589 373 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 OR1D5P58170 312 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RHBDL3P58872 404 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 GNB2P62879 340 aa0.29□□□□□ -2.36
SNORD28-201ENST00000384706 RPS27AP62979 156 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms