RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ADI1Q9BV57 179 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 RAB11FIP5Q9BXF6 653 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 SLC6A17Q9H1V8 727 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 OR51B5Q9H339 312 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 C8orf33Q9H7E9 229 aaPredicted RBP18.46■□□□□ 0.55
GMDS-201ENST00000380805 CD320Q9NPF0 282 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 AASDHPPTQ9NRN7 309 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 ATAD3AQ9NVI7 634 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 DNAJB9Q9UBS3 223 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 WBP11Q9Y2W2 641 aaKnown RBP18.46■□□□□ 0.55
GMDS-201ENST00000380805 V9GYQ6 96 aa18.46■□□□□ 0.55
GMDS-201ENST00000380805 PRKD3O94806 890 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 MYF6P23409 242 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 MAGEA2P43356 314 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 RPS9P46781 194 aaKnown RBP18.45■□□□□ 0.54
GMDS-201ENST00000380805 KIAA1024LP59773 190 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 MERTKQ12866 999 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 VEZF1Q14119 521 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 FOXB2Q5VYV0 432 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 ANKRD26P1Q6NSI1 321 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 SLC9B2Q86UD5 537 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 LINC01555Q8NAE3 123 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 WDR48Q8TAF3 677 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 C16orf78Q8WTQ4 265 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 DNASE1L2Q92874 299 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 EPB41L1Q9H4G0 881 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 PNPLA3Q9NST1 481 aa18.45■□□□□ 0.54
GMDS-201ENST00000380805 SMPD3Q9NY59 655 aaPredicted RBP18.45■□□□□ 0.54
GMDS-201ENST00000380805 ZNF282Q9UDV7 671 aaPredicted RBP18.45■□□□□ 0.54
GMDS-201ENST00000380805 CFAP20Q9Y6A4 193 aaKnown RBP18.45■□□□□ 0.54
GMDS-201ENST00000380805 CACNB4O00305 520 aaPredicted RBP18.44■□□□□ 0.54
GMDS-201ENST00000380805 SH3BGRLO75368 114 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 HPRP00739 348 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 MT-ND1P03886 318 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 RPL10P27635 214 aaKnown RBP18.44■□□□□ 0.54
GMDS-201ENST00000380805 RAB28P51157 221 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 CCR8P51685 355 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 ZNF385BQ569K4 471 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 DUS1LQ6P1R4 473 aaKnown RBP18.44■□□□□ 0.54
GMDS-201ENST00000380805 ZNF621Q6ZSS3 439 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 PTOV1Q86YD1 416 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 CDC26Q8NHZ8 85 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 ZFP90Q8TF47 636 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 NCLNQ969V3 563 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D20Q96BZ9 403 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 C12orf66Q96MD2 445 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 MS4A8Q9BY19 250 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 ZNF717Q9BY31 904 aaPredicted RBP18.44■□□□□ 0.54
GMDS-201ENST00000380805 MRPS26Q9BYN8 205 aaKnown RBP18.44■□□□□ 0.54
GMDS-201ENST00000380805 TPT1P8Q9HAU6 139 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 SAMD4AQ9UPU9 718 aaKnown RBP18.44■□□□□ 0.54
GMDS-201ENST00000380805 PIAS3Q9Y6X2 628 aa18.44■□□□□ 0.54
GMDS-201ENST00000380805 NUP214P35658 2090 aaPredicted RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 HEATR5BQ9P2D3 2071 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBX19O60806 448 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 SERPINA1P01009 418 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 PKLRP30613 574 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 PPP2CBP62714 309 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 PPP2CAP67775 309 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 ADRM1Q16186 407 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 DEPDC1Q5TB30 811 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 RNF220Q5VTB9 566 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 SYNPOQ8N3V7 929 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 ANKRD53Q8N9V6 530 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 OR2L8Q8NGY9 312 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TMBIM1Q969X1 311 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 SIPA1Q96FS4 1042 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 PYURFQ96I23 114 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 VPS50Q96JG6 964 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 CAMK1GQ96NX5 476 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 MVB12BQ9H7P6 319 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 CUEDC1Q9NWM3 386 aaPredicted RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 AHSPQ9NZD4 102 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 SUFUQ9UMX1 484 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 VPS4AQ9UN37 437 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 F5P12259 2224 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3DA0A087WVF3 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3IA0A087WXS9 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3EA0A087X179 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3KA0A087X1G2 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3FA6NER0 549 aaPredicted RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 C10orf142B7Z368 130 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3LB9A6J9 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 CPSF4O95639 269 aaKnown RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 C1QCP02747 245 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3HP0C7X1 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 PABPC4LP0CB38 370 aaKnown RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 ZNF23P17027 643 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 GRSF1Q12849 480 aaKnown RBP eCLIP18.43■□□□□ 0.543e-7■■■■□ 24.8
GMDS-201ENST00000380805 SFSWAPQ12872 951 aaKnown RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 GAB1Q13480 694 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 UAP1L1Q3KQV9 507 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 LIN52Q52LA3 116 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 KHDRBS2Q5VWX1 349 aaKnown RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3GQ6DHY5 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3CQ6IPX1 549 aa18.43■□□□□ 0.54
GMDS-201ENST00000380805 PTCRAQ6ISU1 281 aaPredicted RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 TBC1D3Q8IZP1 549 aaPredicted RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 ZCCHC7Q8N3Z6 543 aaKnown RBP18.43■□□□□ 0.54
GMDS-201ENST00000380805 SVOPLQ8N434 492 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms