RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 LANCL2Q9NS86 450 aa15.88■□□□□ 0.13
SMN2-201ENST00000380741 ARL15Q9NXU5 204 aa15.88■□□□□ 0.13
SMN2-201ENST00000380741 ASIC3Q9UHC3 531 aa15.88■□□□□ 0.13
SMN2-201ENST00000380741 DNALI1O14645 258 aaPredicted RBP15.87■□□□□ 0.13
SMN2-201ENST00000380741 NDUFS4O43181 175 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 MAN1A2O60476 641 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 WISP2O76076 250 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 TNFRSF8P28908 595 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 CA7P43166 264 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 CCR8P51685 355 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 IL2P60568 153 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 PDAP1Q13442 181 aaKnown RBP15.87■□□□□ 0.13
SMN2-201ENST00000380741 HERC3Q15034 1050 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 NSDHLQ15738 373 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 DUPD1Q68J44 220 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 SRRM1Q8IYB3 904 aaKnown RBP15.87■□□□□ 0.13
SMN2-201ENST00000380741 SLC35F6Q8N357 371 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 AFAP1L2Q8N4X5 818 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 PLPP5Q8NEB5 264 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 OR4K1Q8NGD4 311 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 OR56A3Q8NH54 315 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 M1APQ8TC57 530 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 CERS2Q96G23 380 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 SNF8Q96H20 258 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 OR4K3Q96R72 315 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 OR1F2PQ96R84 312 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 HAUS8Q9BT25 410 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 SARGQ9BW04 601 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 HES7Q9BYE0 225 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 PLAC1Q9HBJ0 212 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 ANKRD10Q9NXR5 420 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 SUCOQ9UBS9 1254 aaKnown RBP15.87■□□□□ 0.13
SMN2-201ENST00000380741 SH3BGRL2Q9UJC5 107 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 PCDHGB6Q9Y5F9 930 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 FBN2P35556 2912 aa15.87■□□□□ 0.13
SMN2-201ENST00000380741 PABPN1LA6NDY0 278 aaKnown RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 CCL21O00585 134 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 OR1F1O43749 312 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 GALR3O60755 368 aaPredicted RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 DNAJB6O75190 326 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 B3GALT4O96024 378 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 FHP07954 510 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 IL10P22301 178 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 GRNP28799 593 aaKnown RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 CD96P40200 585 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 AP1S2P56377 157 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 OLR1P78380 273 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 ACTN3Q08043 901 aaPredicted RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 ART3Q13508 389 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 USP10Q14694 798 aaKnown RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 MEP1AQ16819 746 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 BBS9Q3SYG4 887 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 GALNT7Q86SF2 657 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 GPATCH11Q8N954 259 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 MDS2Q8NDY4 140 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 LPAR4Q99677 370 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 UTP23Q9BRU9 249 aaKnown RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 NAT9Q9BTE0 207 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 UNKQ9C0B0 810 aaKnown RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 DDX47Q9H0S4 455 aaKnown RBP15.86■□□□□ 0.13
SMN2-201ENST00000380741 SPNS1Q9H2V7 528 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 KLHL1Q9NR64 748 aa15.86■□□□□ 0.13
SMN2-201ENST00000380741 TRBC2A0A5B9 178 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 MAGEB17A8MXT2 336 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 SERPIND1P05546 499 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 ALOX12P18054 663 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 SLC26A5P58743 744 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 RBPJQ06330 500 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 PWP1Q13610 501 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 OR1C1Q15619 314 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.85■□□□□ 0.13
SMN2-201ENST00000380741 DEFB134Q4QY38 66 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 CATSPEREQ5SY80 951 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 TEDDM1Q5T9Z0 273 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 HECTD2Q5U5R9 776 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 SPINK14Q6IE38 97 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 MRGPRGQ86SM5 289 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 TBC1D20Q96BZ9 403 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 FBXL8Q96CD0 374 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 SCMH1Q96GD3 660 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 OLFM1Q99784 485 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 PPANQ9NQ55 473 aaKnown RBP15.85■□□□□ 0.13
SMN2-201ENST00000380741 IKZF3Q9UKT9 509 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 SNX12Q9UMY4 172 aa15.85■□□□□ 0.13
SMN2-201ENST00000380741 KLF2Q9Y5W3 355 aaPredicted RBP15.85■□□□□ 0.13
SMN2-201ENST00000380741 NCOA6Q14686 2063 aaPredicted RBP15.85■□□□□ 0.13
SMN2-201ENST00000380741 PKDREJQ9NTG1 2253 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 DCHS2Q6V1P9 2916 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 GABRR3A8MPY1 467 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 TTI1O43156 1089 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 CHST10O43529 356 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 SLC19A2O60779 497 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 GUCA1CO95843 209 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 ZNF888P0CJ79 500 aaPredicted RBP15.84■□□□□ 0.13
SMN2-201ENST00000380741 OR4D2P58180 307 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 SKP1P63208 163 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 RGS1Q08116 209 aa15.84■□□□□ 0.13
SMN2-201ENST00000380741 HP1BP3Q5SSJ5 553 aaPredicted RBP15.84■□□□□ 0.13
SMN2-201ENST00000380741 TRMT10BQ6PF06 316 aaKnown RBP15.84■□□□□ 0.13
SMN2-201ENST00000380741 SBSNQ6UWP8 590 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms