RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 MVB12BQ9H7P6 319 aa6.32□□□□□ -1.4
NEDD9-202ENST00000379446 TIGARQ9NQ88 270 aa6.32□□□□□ -1.4
NEDD9-202ENST00000379446 SEMA3GQ9NS98 782 aa6.32□□□□□ -1.4
NEDD9-202ENST00000379446 WSB2Q9NYS7 404 aaPredicted RBP6.32□□□□□ -1.4
NEDD9-202ENST00000379446 RPL26L1Q9UNX3 145 aaKnown RBP6.32□□□□□ -1.4
NEDD9-202ENST00000379446 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
NEDD9-202ENST00000379446 SATB2Q9UPW6 733 aa6.32□□□□□ -1.4
NEDD9-202ENST00000379446 TCRBV5S1A1TA0A578 114 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 COX4I1P13073 169 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RNH1P13489 461 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 HOXD12P35452 270 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SLC7A2P52569 658 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 UBE2NP61088 152 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PITX1P78337 314 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 NFE2L1Q14494 772 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 FLYWCH1Q4VC44 716 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 FAM171BQ6P995 826 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF783Q6ZMS7 281 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZFAND4Q86XD8 727 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PHTF2Q8N3S3 785 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SIRT6Q8N6T7 355 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF781Q8N8C0 355 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PTGR2Q8N8N7 351 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SLC35F5Q8WV83 523 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 STARD8Q92502 1023 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SLC25A36Q96CQ1 311 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 MFSD3Q96ES6 412 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SIGLEC10Q96LC7 697 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IL17FQ96PD4 163 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 GPATCH1Q9BRR8 931 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 KATNBL1Q9H079 304 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ING2Q9H160 280 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ADAMTS6Q9UKP5 1117 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CDYLQ9Y232 598 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 THSD7AQ9UPZ6 1657 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ATP6AP2A0A1C7CYW4 349 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF726A6NNF4 738 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PRRT4C9JH25 899 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 YY2O15391 372 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RGS14O43566 566 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 TRIM13O60858 407 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ATP6AP2O75787 350 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PGLSO95336 258 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 WDPCPO95876 746 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 MT-ND5P03915 603 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 TSPAN8P19075 237 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CNTFP26441 200 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PCSK6P29122 969 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CRATP43155 626 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 LSM3P62310 102 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IRF9Q00978 393 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SERINC3Q13530 473 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SEMA5AQ13591 1074 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF77Q15935 545 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ANKDD1AQ495B1 522 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 AGAP7PQ5VUJ5 663 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ARCQ7LC44 396 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 DCBLD1Q8N8Z6 715 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 MUCL1Q96DR8 90 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 HS6ST2Q96MM7 605 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 AGAP4Q96P64 663 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 TAAR9Q96RI9 348 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RBBP8Q99708 897 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 C20orf27Q9GZN8 174 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PLGRKTQ9HBL7 147 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 STARD5Q9NSY2 213 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ZNF282Q9UDV7 671 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 KRBA1A5PL33 1030 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 PRAMEF11O60813 436 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 GOT2P00505 430 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 GSTT2P0CG29 244 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 GSTT2BP0CG30 244 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ITIH1P19827 911 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CRABP2P29373 138 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RGS19P49795 217 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IDH3AP50213 366 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 ADPRHP54922 357 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SIRPAP78324 504 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 DCDP81605 110 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CTC1Q2NKJ3 1217 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SPANXN3Q5MJ09 141 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 IER5LQ5T953 404 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 DUS1LQ6P1R4 473 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 BNC2Q6ZN30 1099 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 SLC41A1Q8IVJ1 513 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 BHLHE22Q8NFJ8 381 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 TRPC4APQ8TEL6 797 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 KCTD4Q8WVF5 259 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 NKD1Q969G9 470 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RCN3Q96D15 328 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 QKIQ96PU8 341 aaKnown RBP eCLIP6.31□□□□□ -1.49e-8■■■□□ 18.7
NEDD9-202ENST00000379446 CENPOQ9BU64 300 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 CDADC1Q9BWV3 514 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 RCOR3Q9P2K3 495 aaPredicted RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 COPG2Q9UBF2 871 aa6.31□□□□□ -1.4
NEDD9-202ENST00000379446 DHCR7Q9UBM7 475 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 FARSAQ9Y285 508 aaKnown RBP6.31□□□□□ -1.4
NEDD9-202ENST00000379446 EP400Q96L91 3159 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms