RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CAPZA2P47755 286 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 SEPHS1P49903 392 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 DSTNP60981 165 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 C10orf62Q5T681 223 aaPredicted RBP13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 RASGEF1AQ8N9B8 481 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 PSMA8Q8TAA3 256 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 FANCEQ9HB96 536 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 CAPN5O15484 640 aaPredicted RBP13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 NDUFB5O43674 189 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 DIRAS1O95057 198 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 ITPKBP27987 946 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 OGFOD2Q6N063 350 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 CEACAM20Q6UY09 585 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 FAM20CQ8IXL6 584 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 OR7G3Q8NG95 312 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 GTPBP3Q969Y2 492 aaKnown RBP13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 FAM47E-STBD1D6RA91 191 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 H7C0S8 307 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 TAF4O00268 1085 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 SEMA4FO95754 770 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 ASGR2P07307 311 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 HSD3B1P14060 373 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 IL7RP16871 459 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 ALOX12P18054 663 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 DRD1P21728 446 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 LHCGRP22888 699 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 HSD3B2P26439 372 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 DCST1Q5T197 706 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 IER5LQ5T953 404 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 KIAA1161Q6NSJ0 714 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 NXPE4Q6UWF7 544 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 PTCHD4Q6ZW05 846 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 VN1R5Q7Z5H4 357 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 OXR1Q8N573 874 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 LKAAEAR1Q8TD35 194 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 RASSF5Q8WWW0 418 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 ASB16Q96NS5 453 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 C1QTNF1Q9BXJ1 281 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 FOCADQ5VW36 1801 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 OR52A4PA6NMU1 304 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 MAN2B1O00754 1011 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 PRMT3O60678 531 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ALPPL2P10696 532 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 STT3AP46977 705 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 RAB28P51157 221 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CLDN8P56748 225 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CLDN2P57739 230 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 BIKQ13323 160 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 DUS1LQ6P1R4 473 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNF730Q6ZMV8 503 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 SMYD1Q8NB12 490 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 SETD7Q8WTS6 366 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ASB11Q8WXH4 323 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 VMP1Q96GC9 406 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 SLC38A2Q96QD8 506 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 PBX4Q9BYU1 374 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CXorf21Q9HAI6 301 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 DKK3Q9UBP4 350 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CPED1A4D0V7 1026 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 TSC22D2O75157 780 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 OR6A2O95222 327 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 PGDP52209 483 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CRISP3P54108 245 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNF77Q15935 545 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CATSPEREQ5SY80 951 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 LARP4Q71RC2 724 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■□□□□ 9.8
SHROOM1-203ENST00000378679 LSMEM2Q8N112 164 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 RPLP0P6Q8NHW5 317 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 GPR151Q8TDV0 419 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 PDLIM5Q96HC4 596 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 MCCC1Q96RQ3 725 aaPredicted RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 RSPH9Q9H1X1 276 aaPredicted RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 KCNH6Q9H252 994 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 HEMK1Q9Y5R4 338 aaPredicted RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 FEZF1A0PJY2 475 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNF860A6NHJ4 632 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 FADS2P1A8MWK0 482 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 RPL4P36578 427 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CCT3P49368 545 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 INHBCP55103 352 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNF852Q6ZMS4 543 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 NATD1Q8N6N6 113 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 COX18Q8N8Q8 333 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 PIK3C3Q8NEB9 887 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 NCSTNQ92542 709 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 SLC38A4Q969I6 547 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 TMBIM1Q969X1 311 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 MRPL38Q96DV4 380 aaKnown RBP13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 APIPQ96GX9 242 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 BIRC8Q96P09 236 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNF576Q9H609 170 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 MVB12BQ9H7P6 319 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 RDH14Q9HBH5 336 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 KLHL42Q9P2K6 505 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 NUMBLQ9Y6R0 609 aa13.67□□□□□ -0.22
SHROOM1-203ENST00000378679 CABIN1Q9Y6J0 2220 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms