RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 H3BQ06 376 aaPredicted RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 PCDH17O14917 1159 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 SLC10A3P09131 477 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 RACK1P63244 317 aaKnown RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 IRF8Q02556 426 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 DMPKQ09013 629 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 GANABQ14697 944 aaKnown RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 XKR6Q5GH73 641 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 FAM26DQ5JW98 314 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 SPANXN2Q5MJ10 180 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 TRAF7Q6Q0C0 670 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 NRARPQ7Z6K4 114 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 FAM217AQ8IXS0 508 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 OR8H2Q8N162 312 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 DMRTB1Q96MA1 342 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 TSEN34Q9BSV6 310 aaKnown RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 NDEL1Q9GZM8 345 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 DNAJC11Q9NVH1 559 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 SH3BP4Q9P0V3 963 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 TBC1D24Q9ULP9 559 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 LOC110117498-PIK3R3F6TDL0 507 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 ZW10O43264 779 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 MFN2O95140 757 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 OR2B6P58173 313 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 AP1S1P61966 158 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 SELENOWP63302 87 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 THOC7Q6I9Y2 204 aaKnown RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 VASH1Q7L8A9 365 aaPredicted RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 FAM9CQ8IZT9 166 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 VANGL1Q8TAA9 524 aaPredicted RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 CDK5RAP1Q96SZ6 601 aaKnown RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 CEP44Q9C0F1 390 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 CCDC59Q9P031 241 aaKnown RBP17.33■□□□□ 0.36
GNE-201ENST00000377902 ACSL6Q9UKU0 697 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 TMPRSS11EQ9UL52 423 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 DUSP12Q9UNI6 340 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 PADI2Q9Y2J8 665 aa17.33■□□□□ 0.36
GNE-201ENST00000377902 GLTPD2A6NH11 291 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 FAM227AF5H4B4 570 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 JUPP14923 745 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 RAE1P78406 368 aaKnown RBP17.32■□□□□ 0.36
GNE-201ENST00000377902 SMAD3P84022 425 aaKnown RBP17.32■□□□□ 0.36
GNE-201ENST00000377902 SMARCB1Q12824 385 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 LRRC26Q2I0M4 334 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 DGKKQ5KSL6 1271 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 ATAD3CQ5T2N8 411 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 AGAP6Q5VW22 663 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 BBS7Q8IWZ6 715 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 C1orf52Q8N6N3 182 aaKnown RBP17.32■□□□□ 0.36
GNE-201ENST00000377902 OR6F1Q8NGZ6 308 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 ASIC4Q96FT7 647 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 AGAP4Q96P64 663 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 TCF25Q9BQ70 676 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 FAM120CQ9NX05 1096 aaKnown RBP17.32■□□□□ 0.36
GNE-201ENST00000377902 IMPAD1Q9NX62 359 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 ZDHHC3Q9NYG2 299 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 PEX16Q9Y5Y5 336 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 GPX5O75715 221 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 PTSQ03393 145 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 ACSM2AQ08AH3 577 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 CPTPQ5TA50 214 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 ACSM2BQ68CK6 577 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 MSANTD1Q6ZTZ1 278 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 CCDC190Q86UF4 302 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 MGLLQ99685 303 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 RETREG1Q9H6L5 497 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 MUTYHQ9UIF7 546 aa17.32■□□□□ 0.36
GNE-201ENST00000377902 CASP8AP2Q9UKL3 1982 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 PDZK1P1A8MUH7 402 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 ARHGAP33O14559 1287 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 SCAMP2O15127 329 aaKnown RBP17.31■□□□□ 0.36
GNE-201ENST00000377902 RGS5O15539 181 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 ZNF821O75541 412 aaPredicted RBP17.31■□□□□ 0.36
GNE-201ENST00000377902 KRT8P05787 483 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 LHCGRP22888 699 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 AZGP1P25311 298 aaKnown RBP17.31■□□□□ 0.36
GNE-201ENST00000377902 ABRQ12979 859 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 SSX1Q16384 188 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 GPR33Q49SQ1 333 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 CCSMST1Q4G0I0 132 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 MLIPQ5VWP3 458 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 LYPLAL1Q5VWZ2 237 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 ATCAYQ86WG3 371 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 CPA6Q8N4T0 437 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 OR4C15Q8NGM1 316 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 SAMD11Q96NU1 681 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 CASD1Q96PB1 797 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 CNPPD1Q9BV87 410 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 TRPM5Q9NZQ8 1165 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 A3GALT2U3KPV4 340 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 SEPT4O43236 478 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 IDH3BO43837 385 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 PTPN2P17706 415 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 POU1F1P28069 291 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 TNFSF8P32971 234 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 SOX3P41225 446 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 SLC15A1P46059 708 aa17.31■□□□□ 0.36
GNE-201ENST00000377902 HTR3AP46098 478 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms