RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 MCCD1P59942 119 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 C9orf64Q5T6V5 341 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 CPZQ66K79 652 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 MOB2Q70IA6 237 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 LACC1Q8IV20 430 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 VWA5B2Q8N398 1253 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 FERD3LQ96RJ6 166 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 MGME1Q9BQP7 344 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 NAA50Q9GZZ1 169 aaKnown RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 PAQR5Q9NXK6 330 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TRIM64CA6NLI5 447 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 IQCF5A8MTL0 148 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 PRKYO43930 277 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 MITFO75030 526 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 SOCS5O75159 536 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 STSP08842 583 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 JUPP14923 745 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 HOXA11P31270 313 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 RPL4P36578 427 aaKnown RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF763Q0D2J5 394 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TBCEQ15813 527 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ZBTB6Q15916 424 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 RAB41Q5JT25 222 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 REEP3Q6NUK4 255 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 MAMDC4Q6UXC1 1216 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 OR10T2Q8NGX3 314 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 FATE1Q969F0 183 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TMEM27Q9HBJ8 222 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ASB4Q9Y574 426 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 A0A0U1RQF3 1178 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 DAPL1A0PJW8 107 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 FZD9O00144 591 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 WWP2O00308 870 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 SCAMP2O15127 329 aaKnown RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TRIM3O75382 744 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF30P17039 623 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 INHBEP58166 350 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 VEZF1Q14119 521 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 SLBPQ14493 270 aaKnown RBP eCLIP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 PTCHD3Q3KNS1 767 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 CARD16Q5EG05 197 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF789Q5FWF6 425 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 NCEH1Q6PIU2 408 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 HSDL2Q6YN16 418 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 NXPE1Q8N323 547 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ACVR1CQ8NER5 493 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 VMP1Q96GC9 406 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 CCM2Q9BSQ5 444 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 YIPF2Q9BWQ6 316 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TIGARQ9NQ88 270 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 C12orf4Q9NQ89 552 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ABCB8Q9NUT2 735 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 CD84Q9UIB8 345 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 HMX3A6NHT5 357 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 OR2AG2A6NM03 316 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TBX18O95935 607 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 BCHEP06276 602 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 CDK1P06493 297 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 IFI30P13284 250 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 RPS24P62847 133 aaKnown RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 NFATC2Q13469 925 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 GRB14Q14449 540 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TTLQ8NG68 377 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 OR52B6Q8NGF0 335 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 BPIFB1Q8TDL5 484 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ACOT12Q8WYK0 555 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 OR8D1Q8WZ84 308 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ATOH8Q96SQ7 321 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ZSCAN5AQ9BUG6 496 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 GSDMCQ9BYG8 508 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ZBTB20Q9HC78 741 aaPredicted RBP8.48□□□□□ -1.05
PCDH9-202ENST00000377865 ACOT13Q9NPJ3 140 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 TRIM36Q9NQ86 728 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 C14orf105Q9NVL8 296 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHB14Q9Y5E9 798 aa8.48□□□□□ -1.05
PCDH9-202ENST00000377865 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 INMT-MINDY4F8WBC2 141 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 OR6A2O95222 327 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 KCNA5P22460 613 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 CFL1P23528 166 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HTR1BP28222 390 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 GGT2P36268 569 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 DPP6P42658 865 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 SELPLGQ14242 412 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 KCNJ8Q15842 424 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ANKDD1AQ495B1 522 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RNASE12Q5GAN4 147 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 NUDT13Q86X67 352 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ARHGAP12Q8IWW6 846 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ACAT2Q9BWD1 397 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 SLC2A11Q9BYW1 496 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PIGUQ9H490 435 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 MAT2BQ9NZL9 334 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TNFRSF10DQ9UBN6 386 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HSPB11Q9Y547 144 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HEMK1Q9Y5R4 338 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 UNCXA6NJT0 531 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ISM1B1AKI9 464 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 AOC2O75106 756 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms